List of Faculty Publications

Below is a list of Faculty publications imported from PubMed or manually added. By default, publications are sorted by year with titles displayed in ascending alphabetical order.
Shortcuts: Wühr, Martin | Wingreen, Ned | Wieschaus, Eric | Troyanskaya, Olga | Tilghman, Shirley | Storey, John | Singh, Mona | Shvartsman, Stanislav | Shaevitz, Joshua | Rabinowitz, Joshua | Murphy, Coleen | Levine, Michael {Levine, Michael S.} | Gregor, Thomas | Botstein, David | Bialek, William | Ayroles, Julien | Andolfatto, Peter | Akey, Joshua

2001
M. E. Garber, Troyanskaya, O. G., Schluens, K., Petersen, S., Thaesler, Z., Pacyna-Gengelbach, M., van de Rijn, M., Rosen, G. D., Perou, C. M., Whyte, R. I., Altman, R. B., Brown, P. O., Botstein, D., and Petersen, I., Diversity of gene expression in adenocarcinoma of the lung., Proc Natl Acad Sci U S A, vol. 98, no. 24, pp. 13784-9, 2001.
P. B. Vrana, Matteson, P. G., Schmidt, J. V., Ingram, R. S., Joyce, A., Prince, K. L., Dewey, M. J., and Tilghman, S. M., Genomic imprinting of a placental lactogen gene in Peromyscus., Dev Genes Evol, vol. 211, no. 11, pp. 523-32, 2001.
L. J. Kurihara, Kikuchi, T., Wada, K., and Tilghman, S. M., Loss of Uch-L1 and Uch-L3 leads to neurodegeneration, posterior paralysis and dysphagia., Hum Mol Genet, vol. 10, no. 18, pp. 1963-70, 2001.
O. Troyanskaya, Cantor, M., Sherlock, G., Brown, P., Hastie, T., Tibshirani, R., Botstein, D., and Altman, R. B., Missing value estimation methods for DNA microarrays., Bioinformatics, vol. 17, no. 6, pp. 520-5, 2001.
K. J. Arrow, Axelrod, J., Benacerraf, B., Berg, P., Bishop, J. M., Bloembergen, N., Brown, H. C., Cibelli, J., Cohen, S., Cooper, L. N., Corey, E. J., Cronin, J. W., Curl, R., Dulbecco, R., Fischer, E. H., Fitch, V. L., Fogel, R., Friedman, J. I., Furchgott, R. F., Gell-Mann, M., Gilbert, W., Gilman, A., Glaser, D., Glashow, S. L., Green, R. M., Greengard, P., Guillemin, R., Hayflick, L., Hauptman, H. A., Heckman, J. J., Heeger, A., Herschbach, D., Hubel, D. H., Hulse, R., Kandel, E., Karle, J., Klein, L. R., Kohn, W., Kornberg, A., Krebs, E. G., Lanza, R. P., Laughlin, R., Lederman, L., Lee, D. M., Lewis, E., Lipscomb, W., Marcus, R. A., McFadden, D., Merrifield, R. B., Merton, R., Modigliani, F., Molina, M. J., Murad, F., Nirenberg, M. W., North, D. C., Olah, G. A., Osheroff, D., Palade, G. E., Perl, M., Ramsey, N. F., Richter, B., Roberts, R. J., Samuelson, P. A., Schwartz, M., Sharp, P. A., Smalley, R. E., Smith, H. O., Solow, R. M., Stormer, H., Taube, H., Taylor, R., Thomas, E. D., Tobin, J., Tonegawa, S., Townes, C., Watson, J. D., Weinberg, S., Weller, T. H., West, M. D., Wieschaus, E. F., Wiesel, T. N., and Wilson, R. W., Nobel laureates' letter to President Bush., Washington Post, p. A02, 2001.
C. D. van Raamsdonk and Tilghman, S. M., Optimizing the detection of nascent transcripts by RNA fluorescence in situ hybridization., Nucleic Acids Res, vol. 29, no. 8, pp. E42-2, 2001.
J. T. Blankenship and Wieschaus, E., Two new roles for the Drosophila AP patterning system in early morphogenesis., Development, vol. 128, no. 24, pp. 5129-38, 2001.
2000
M. J. O'Neill, Ingram, R. S., Vrana, P. B., and Tilghman, S. M., Allelic expression of IGF2 in marsupials and birds., Dev Genes Evol, vol. 210, no. 1, pp. 18-20, 2000.
A. T. Hark, Schoenherr, C. J., Katz, D. J., Ingram, R. S., Levorse, J. M., and Tilghman, S. M., CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus., Nature, vol. 405, no. 6785, pp. 486-9, 2000.
J. V. Schmidt, Matteson, P. G., Jones, B. K., Guan, X. J., and Tilghman, S. M., The Dlk1 and Gtl2 genes are linked and reciprocally imprinted., Genes Dev, vol. 14, no. 16, pp. 1997-2002, 2000.
C. D. van Raamsdonk and Tilghman, S. M., Dosage requirement and allelic expression of PAX6 during lens placode formation., Development, vol. 127, no. 24, pp. 5439-48, 2000.
S. P. Gross, Welte, M. A., Block, S. M., and Wieschaus, E. F., Dynein-mediated cargo transport in vivo. A switch controls travel distance., J Cell Biol, vol. 148, no. 5, pp. 945-56, 2000.
O. G. Vukmirovic and Tilghman, S. M., Exploring genome space., Nature, vol. 405, no. 6788, pp. 820-2, 2000.
L. J. Kurihara, Semenova, E., Levorse, J. M., and Tilghman, S. M., Expression and functional analysis of Uch-L3 during mouse development., Mol Cell Biol, vol. 20, no. 7, pp. 2498-504, 2000.
P. B. Vrana, Fossella, J. A., Matteson, P., del Rio, T., O'Neill, M. J., and Tilghman, S. M., Genetic and epigenetic incompatibilities underlie hybrid dysgenesis in Peromyscus., Nat Genet, vol. 25, no. 1, pp. 120-4, 2000.
J. Grosshans and Wieschaus, E., A genetic link between morphogenesis and cell division during formation of the ventral furrow in Drosophila., Cell, vol. 101, no. 5, pp. 523-31, 2000.
T. Lecuit and Wieschaus, E., Polarized insertion of new membrane from a cytoplasmic reservoir during cleavage of the Drosophila embryo., J Cell Biol, vol. 150, no. 4, pp. 849-60, 2000.
C. Hunter and Wieschaus, E., Regulated expression of nullo is required for the formation of distinct apical and basal adherens junctions in the Drosophila blastoderm., J Cell Biol, vol. 150, no. 2, pp. 391-401, 2000.
1998
A. L. Webber and Tilghman, S. M., The absence of enhancer competition between Igf2 and H19 following transfer into differentiated cells., Mol Cell Biol, vol. 18, no. 4, pp. 1903-10, 1998.
A. T. Hark and Tilghman, S. M., Chromatin conformation of the H19 epigenetic mark., Hum Mol Genet, vol. 7, no. 12, pp. 1979-85, 1998.
M. A. Welte, Gross, S. P., Postner, M., Block, S. M., and Wieschaus, E. F., Developmental regulation of vesicle transport in Drosophila embryos: forces and kinetics., Cell, vol. 92, no. 4, pp. 547-57, 1998.
P. B. Vrana, Guan, X. J., Ingram, R. S., and Tilghman, S. M., Genomic imprinting is disrupted in interspecific Peromyscus hybrids., Nat Genet, vol. 20, no. 4, pp. 362-5, 1998.
P. Morize, Christiansen, A. E., Costa, M., Parks, S., and Wieschaus, E., Hyperactivation of the folded gastrulation pathway induces specific cell shape changes., Development, vol. 125, no. 4, pp. 589-97, 1998.
B. K. Jones, Levorse, J. M., and Tilghman, S. M., Igf2 imprinting does not require its own DNA methylation or H19 RNA., Genes Dev, vol. 12, no. 14, pp. 2200-7, 1998.
A. L. Webber, Ingram, R. S., Levorse, J. M., and Tilghman, S. M., Location of enhancers is essential for the imprinting of H19 and Igf2 genes., Nature, vol. 391, no. 6668, pp. 711-5, 1998.
T. Caspary, Cleary, M. A., Baker, C. C., Guan, X. J., and Tilghman, S. M., Multiple mechanisms regulate imprinting of the mouse distal chromosome 7 gene cluster., Mol Cell Biol, vol. 18, no. 6, pp. 3466-74, 1998.
T. Schupbach and Wieschaus, E., Probing for gene specificity in epithelial development., Int J Dev Biol, vol. 42, no. 3, pp. 249-55, 1998.
Y. Ahmed, Hayashi, S., Levine, A., and Wieschaus, E., Regulation of armadillo by a Drosophila APC inhibits neuronal apoptosis during retinal development., Cell, vol. 93, no. 7, pp. 1171-82, 1998.
1994
K. Pfeifer and Tilghman, S. M., Allele-specific gene expression in mammals: the curious case of the imprinted RNAs., Genes Dev, vol. 8, no. 16, pp. 1867-74, 1994.
K. D. Irvine and Wieschaus, E., Cell intercalation during Drosophila germband extension and its regulation by pair-rule segmentation genes., Development, vol. 120, no. 4, pp. 827-41, 1994.
C. Rauskolb and Wieschaus, E., Coordinate regulation of downstream genes by extradenticle and the homeotic selector proteins., EMBO J, vol. 13, no. 15, pp. 3561-9, 1994.
D. L. Metallinos, Oppenheimer, A. J., Rinchik, E. M., Russell, L. B., Dietrich, W., and Tilghman, S. M., Fine structure mapping and deletion analysis of the murine piebald locus., Genetics, vol. 136, no. 1, pp. 217-23, 1994.
K. D. Irvine and Wieschaus, E., fringe, a Boundary-specific signaling molecule, mediates interactions between dorsal and ventral cells during Drosophila wing development., Cell, vol. 79, no. 4, pp. 595-606, 1994.
J. M. Rossi, Chen, H., and Tilghman, S. M., Genetic map of the fused locus on mouse chromosome 17., Genomics, vol. 23, no. 1, pp. 178-84, 1994.
P. Armand, Knapp, A. C., Hirsch, A. J., Wieschaus, E. F., and Cole, M. D., A novel basic helix-loop-helix protein is expressed in muscle attachment sites of the Drosophila epidermis., Mol Cell Biol, vol. 14, no. 6, pp. 4145-54, 1994.
M. A. Postner and Wieschaus, E. F., The nullo protein is a component of the actin-myosin network that mediates cellularization in Drosophila melanogaster embryos., J Cell Sci, vol. 107 ( Pt 7), pp. 1863-73, 1994.
W. J. Pavan and Tilghman, S. M., Piebald lethal (sl) acts early to disrupt the development of neural crest-derived melanocytes., Proc Natl Acad Sci U S A, vol. 91, no. 15, pp. 7159-63, 1994.
M. Costa, Wilson, E. T., and Wieschaus, E., A putative cell signal encoded by the folded gastrulation gene coordinates cell shape changes during Drosophila gastrulation., Cell, vol. 76, no. 6, pp. 1075-89, 1994.
M. Peifer, Sweeton, D., Casey, M., and Wieschaus, E., wingless signal and Zeste-white 3 kinase trigger opposing changes in the intracellular distribution of Armadillo., Development, vol. 120, no. 2, pp. 369-80, 1994.
1993
E. D. Schejter and Wieschaus, E., bottleneck acts as a regulator of the microfilament network governing cellularization of the Drosophila embryo., Cell, vol. 75, no. 2, pp. 373-85, 1993.
S. M. Tilghman, DNA methylation: a phoenix rises., Proc Natl Acad Sci U S A, vol. 90, no. 19, pp. 8761-2, 1993.
M. S. Bartolomei, Webber, A. L., Brunkow, M. E., and Tilghman, S. M., Epigenetic mechanisms underlying the imprinting of the mouse H19 gene., Genes Dev, vol. 7, no. 9, pp. 1663-73, 1993.
C. Rauskolb, Peifer, M., and Wieschaus, E., extradenticle, a regulator of homeotic gene activity, is a homolog of the homeobox-containing human proto-oncogene pbx1., Cell, vol. 74, no. 6, pp. 1101-12, 1993.
E. D. Schejter and Wieschaus, E., Functional elements of the cytoskeleton in the early Drosophila embryo., Annu Rev Cell Biol, vol. 9, pp. 67-99, 1993.
S. M. Tilghman, Bartolomei, M. S., Webber, A. L., Brunkow, M. E., Saam, J., Leighton, P. A., Pfeifer, K., and Zemel, S., Parental imprinting of the H19 and Igf2 genes in the mouse., Cold Spring Harb Symp Quant Biol, vol. 58, pp. 287-95, 1993.
M. Peifer and Wieschaus, E., The product of the Drosophila melanogaster segment polarity gene armadillo is highly conserved in sequence and expression in the housefly Musca domestica., J Mol Evol, vol. 36, no. 3, pp. 224-33, 1993.
M. Peifer, Orsulic, S., Sweeton, D., and Wieschaus, E., A role for the Drosophila segment polarity gene armadillo in cell adhesion and cytoskeletal integrity during oogenesis., Development, vol. 118, no. 4, pp. 1191-207, 1993.
A. Bejsovec and Wieschaus, E., Segment polarity gene interactions modulate epidermal patterning in Drosophila embryos., Development, vol. 119, no. 2, pp. 501-17, 1993.
1992
L. S. Rose and Wieschaus, E., The Drosophila cellularization gene nullo produces a blastoderm-specific transcript whose levels respond to the nucleocytoplasmic ratio., Genes Dev, vol. 6, no. 7, pp. 1255-68, 1992.
J. M. Rossi, Burke, D. T., Leung, J. C., Koos, D. S., Chen, H., and Tilghman, S. M., Genomic analysis using a yeast artificial chromosome library with mouse DNA inserts., Proc Natl Acad Sci U S A, vol. 89, no. 6, pp. 2456-60, 1992.
M. A. Postner, Miller, K. G., and Wieschaus, E. F., Maternal effect mutations of the sponge locus affect actin cytoskeletal rearrangements in Drosophila melanogaster embryos., J Cell Biol, vol. 119, no. 5, pp. 1205-18, 1992.
E. Wieschaus, Perrimon, N., and Finkelstein, R., orthodenticle activity is required for the development of medial structures in the larval and adult epidermis of Drosophila., Development, vol. 115, no. 3, pp. 801-11, 1992.
S. Zemel, Bartolomei, M. S., and Tilghman, S. M., Physical linkage of two mammalian imprinted genes, H19 and insulin-like growth factor 2., Nat Genet, vol. 2, no. 1, pp. 61-5, 1992.
J. Vacher, Camper, S. A., Krumlauf, R., Compton, R. S., and Tilghman, S. M., raf regulates the postnatal repression of the mouse alpha-fetoprotein gene at the posttranscriptional level., Mol Cell Biol, vol. 12, no. 2, pp. 856-64, 1992.
E. D. Schejter, Rose, L. S., Postner, M. A., and Wieschaus, E., Role of the zygotic genome in the restructuring of the actin cytoskeleton at the cycle-14 transition during Drosophila embryogenesis., Cold Spring Harb Symp Quant Biol, vol. 57, pp. 653-9, 1992.
M. Peifer, McCrea, P. D., Green, K. J., Wieschaus, E., and Gumbiner, B. M., The vertebrate adhesive junction proteins beta-catenin and plakoglobin and the Drosophila segment polarity gene armadillo form a multigene family with similar properties., J Cell Biol, vol. 118, no. 3, pp. 681-91, 1992.
J. A. Emerson, Vacher, J., Cirillo, L. A., Tilghman, S. M., and Tyner, A. L., The zonal expression of alpha-fetoprotein transgenes in the livers of adult mice., Dev Dyn, vol. 195, no. 1, pp. 55-66, 1992.
1991
S. Parks and Wieschaus, E., The Drosophila gastrulation gene concertina encodes a G alpha-like protein., Cell, vol. 64, no. 2, pp. 447-58, 1991.
M. E. Brunkow and Tilghman, S. M., Ectopic expression of the H19 gene in mice causes prenatal lethality., Genes Dev, vol. 5, no. 6, pp. 1092-101, 1991.
T. Schupbach and Wieschaus, E., Female sterile mutations on the second chromosome of Drosophila melanogaster. II. Mutations blocking oogenesis or altering egg morphology., Genetics, vol. 129, no. 4, pp. 1119-36, 1991.
D. Sweeton, Parks, S., Costa, M., and Wieschaus, E., Gastrulation in Drosophila: the formation of the ventral furrow and posterior midgut invaginations., Development, vol. 112, no. 3, pp. 775-89, 1991.
D. T. Burke, Rossi, J. M., Leung, J., Koos, D. S., and Tilghman, S. M., A mouse genomic library of yeast artificial chromosome clones., Mamm Genome, vol. 1, no. 1, p. 65, 1991.
S. M. Tilghman, Parental imprinting in the mouse., Harvey Lect, vol. 87, pp. 69-84, 1991.
M. S. Bartolomei, Zemel, S., and Tilghman, S. M., Parental imprinting of the mouse H19 gene., Nature, vol. 351, no. 6322, pp. 153-5, 1991.
M. Peifer, Rauskolb, C., Williams, M., Riggleman, B., and Wieschaus, E., The segment polarity gene armadillo interacts with the wingless signaling pathway in both embryonic and adult pattern formation., Development, vol. 111, no. 4, pp. 1029-43, 1991.
1990
J. Vacher and Tilghman, S. M., Dominant negative regulation of the mouse alpha-fetoprotein gene in adult liver., Science, vol. 250, no. 4988, pp. 1732-5, 1990.
D. E. Coulter, Swaykus, E. A., Beran-Koehn, M. A., Goldberg, D., Wieschaus, E., and Schedl, P., Molecular analysis of odd-skipped, a zinc finger encoding segmentation gene with a novel pair-rule expression pattern., EMBO J, vol. 9, no. 11, pp. 3795-804, 1990.
M. Peifer and Wieschaus, E., Mutations in the Drosophila gene extradenticle affect the way specific homeo domain proteins regulate segmental identity., Genes Dev, vol. 4, no. 7, pp. 1209-23, 1990.
A. L. Tyner, Godbout, R., Compton, R. S., and Tilghman, S. M., The ontogeny of alpha-fetoprotein gene expression in the mouse gastrointestinal tract., J Cell Biol, vol. 110, no. 4, pp. 915-27, 1990.
C. I. Brannan, Dees, E. C., Ingram, R. S., and Tilghman, S. M., The product of the H19 gene may function as an RNA., Mol Cell Biol, vol. 10, no. 1, pp. 28-36, 1990.
B. T. Spear and Tilghman, S. M., Role of alpha-fetoprotein regulatory elements in transcriptional activation in transient heterokaryons., Mol Cell Biol, vol. 10, no. 10, pp. 5047-54, 1990.
M. Peifer and Wieschaus, E., The segment polarity gene armadillo encodes a functionally modular protein that is the Drosophila homolog of human plakoglobin., Cell, vol. 63, no. 6, pp. 1167-76, 1990.
B. Riggleman, Schedl, P., and Wieschaus, E., Spatial expression of the Drosophila segment polarity gene armadillo is posttranscriptionally regulated by wingless., Cell, vol. 63, no. 3, pp. 549-60, 1990.
L. Simpson and Wieschaus, E., Zygotic activity of the nullo locus is required to stabilize the actin-myosin network during cellularization in Drosophila., Development, vol. 110, no. 3, pp. 851-63, 1990.
1988
R. Godbout and Tilghman, S. M., Configuration of the alpha-fetoprotein regulatory domain during development., Genes Dev, vol. 2, no. 8, pp. 949-56, 1988.
R. Godbout, Ingram, R. S., and Tilghman, S. M., Fine-structure mapping of the three mouse alpha-fetoprotein gene enhancers., Mol Cell Biol, vol. 8, no. 3, pp. 1169-78, 1988.
D. E. Coulter and Wieschaus, E., Gene activities and segmental patterning in Drosophila: analysis of odd-skipped and pair-rule double mutants., Genes Dev, vol. 2, no. 12B, pp. 1812-23, 1988.
P. T. Merrill, Sweeton, D., and Wieschaus, E., Requirements for autosomal gene activity during precellular stages of Drosophila melanogaster., Development, vol. 104, no. 3, pp. 495-509, 1988.
E. Wieschaus and Sweeton, D., Requirements for X-linked zygotic gene activity during cellularization of early Drosophila embryos., Development, vol. 104, no. 3, pp. 483-93, 1988.
S. B. Zusman, Sweeton, D., and Wieschaus, E. F., short gastrulation, a mutation causing delays in stage-specific cell shape changes during gastrulation in Drosophila melanogaster., Dev Biol, vol. 129, no. 2, pp. 417-27, 1988.
V. Pachnis, Brannan, C. I., and Tilghman, S. M., The structure and expression of a novel gene activated in early mouse embryogenesis., EMBO J, vol. 7, no. 3, pp. 673-81, 1988.
H. Yoo-Warren, Pachnis, V., Ingram, R. S., and Tilghman, S. M., Two regulatory domains flank the mouse H19 gene., Mol Cell Biol, vol. 8, no. 11, pp. 4707-15, 1988.

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