List of Faculty Publications

Below is a list of Faculty publications imported from PubMed or manually added. By default, publications are sorted by year with titles displayed in ascending alphabetical order.
Shortcuts: Wühr, Martin | Wingreen, Ned | Wieschaus, Eric | Troyanskaya, Olga | Tilghman, Shirley | Storey, John | Singh, Mona | Shvartsman, Stanislav | Shaevitz, Joshua | Rabinowitz, Joshua | Murphy, Coleen | Levine, Michael {Levine, Michael S.} | Gregor, Thomas | Botstein, David | Bialek, William | Ayroles, Julien | Andolfatto, Peter | Akey, Joshua

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African Americans
S. Tucci and Akey, J. M., The long walk to African genomics., Genome Biol, vol. 20, no. 1, p. 130, 2019.
Animals
J. P. Gergen and Wieschaus, E. F., The localized requirements for a gene affecting segmentation in Drosophila: analysis of larvae mosaic for runt., Dev Biol, vol. 109, no. 2, pp. 321-35, 1985.
L. J. Kurihara, Kikuchi, T., Wada, K., and Tilghman, S. M., Loss of Uch-L1 and Uch-L3 leads to neurodegeneration, posterior paralysis and dysphagia., Hum Mol Genet, vol. 10, no. 18, pp. 1963-70, 2001.
A. Stathopoulos and Levine, M., Linear signaling in the Toll-Dorsal pathway of Drosophila: activated Pelle kinase specifies all threshold outputs of gene expression while the bHLH protein Twist specifies a subset., Development, vol. 129, no. 14, pp. 3411-9, 2002.
A. Marie Sokac and Wieschaus, E., Local actin-dependent endocytosis is zygotically controlled to initiate Drosophila cellularization., Dev Cell, vol. 14, no. 5, pp. 775-86, 2008.
D. Botstein, Lasker∼Koshland to genetics pioneer., Cell, vol. 158, no. 6, pp. 1230-2, 2014.
M. Levine, Cattoglio, C., and Tjian, R., Looping back to leap forward: transcription enters a new era., Cell, vol. 157, no. 1, pp. 13-25, 2014.
A. Stathopoulos and Levine, M., Localized repressors delineate the neurogenic ectoderm in the early Drosophila embryo., Dev Biol, vol. 280, no. 2, pp. 482-93, 2005.
A. L. Webber, Ingram, R. S., Levorse, J. M., and Tilghman, S. M., Location of enhancers is essential for the imprinting of H19 and Igf2 genes., Nature, vol. 391, no. 6668, pp. 711-5, 1998.
P. Andolfatto and Wall, J. D., Linkage disequilibrium patterns across a recombination gradient in African Drosophila melanogaster., Genetics, vol. 165, no. 3, pp. 1289-305, 2003.
S. M. Tilghman, Lessons learned, promises kept: a biologist's eye view of the Genome Project., Genome Res, vol. 6, no. 9, pp. 773-80, 1996.
X. J. Guan, Arhin, G., Leung, J., and Tilghman, S. M., Linkage between vitamin D-binding protein and alpha-fetoprotein in the mouse., Mamm Genome, vol. 7, no. 2, pp. 103-6, 1996.
A. M. Berezhkovskii, Batsilas, L., and Shvartsman, S. Y., Ligand trapping in epithelial layers and cell cultures., Biophys Chem, vol. 107, no. 3, pp. 221-7, 2004.
J. J. Kamphorst, Fan, J., Lu, W., White, E., and Rabinowitz, J. D., Liquid chromatography-high resolution mass spectrometry analysis of fatty acid metabolism., Anal Chem, vol. 83, no. 23, pp. 9114-22, 2011.
V. C. Calhoun and Levine, M., Long-range enhancer-promoter interactions in the Scr-Antp interval of the Drosophila Antennapedia complex., Proc Natl Acad Sci U S A, vol. 100, no. 17, pp. 9878-83, 2003.
Antennapedia Homeodomain Protein
V. C. Calhoun and Levine, M., Long-range enhancer-promoter interactions in the Scr-Antp interval of the Drosophila Antennapedia complex., Proc Natl Acad Sci U S A, vol. 100, no. 17, pp. 9878-83, 2003.
Awards and Prizes
D. Botstein, Lasker∼Koshland to genetics pioneer., Cell, vol. 158, no. 6, pp. 1230-2, 2014.
Biological Evolution
D. Botstein, Lasker∼Koshland to genetics pioneer., Cell, vol. 158, no. 6, pp. 1230-2, 2014.
S. Tucci and Akey, J. M., The long walk to African genomics., Genome Biol, vol. 20, no. 1, p. 130, 2019.
Cell Communication
M. Pribyl, Muratov, C. B., and Shvartsman, S. Y., Long-range signal transmission in autocrine relays., Biophys J, vol. 84, no. 2 Pt 1, pp. 883-96, 2003.
Cell Movement
J. W. Shaevitz and Fletcher, D. A., Load fluctuations drive actin network growth., Proc Natl Acad Sci U S A, vol. 104, no. 40, pp. 15688-92, 2007.
Chromatography, Liquid
M. F. Clasquin, Melamud, E., and Rabinowitz, J. D., LC-MS data processing with MAVEN: a metabolomic analysis and visualization engine., Curr Protoc Bioinformatics, vol. Chapter 14, p. Unit14.11, 2012.
Disease
D. Botstein, Lasker∼Koshland to genetics pioneer., Cell, vol. 158, no. 6, pp. 1230-2, 2014.
DNA-Directed RNA Polymerases
M. Levine, Cattoglio, C., and Tjian, R., Looping back to leap forward: transcription enters a new era., Cell, vol. 157, no. 1, pp. 13-25, 2014.
Feedback, Physiological
M. Pribyl, Muratov, C. B., and Shvartsman, S. Y., Long-range signal transmission in autocrine relays., Biophys J, vol. 84, no. 2 Pt 1, pp. 883-96, 2003.
Fushi Tarazu Transcription Factors
V. C. Calhoun and Levine, M., Long-range enhancer-promoter interactions in the Scr-Antp interval of the Drosophila Antennapedia complex., Proc Natl Acad Sci U S A, vol. 100, no. 17, pp. 9878-83, 2003.
Gene Expression Regulation
M. Levine, Cattoglio, C., and Tjian, R., Looping back to leap forward: transcription enters a new era., Cell, vol. 157, no. 1, pp. 13-25, 2014.
Genetics, Medical
D. Botstein, Lasker∼Koshland to genetics pioneer., Cell, vol. 158, no. 6, pp. 1230-2, 2014.
Genomics
S. Tucci and Akey, J. M., The long walk to African genomics., Genome Biol, vol. 20, no. 1, p. 130, 2019.
History, 20th Century
D. Botstein, Lasker∼Koshland to genetics pioneer., Cell, vol. 158, no. 6, pp. 1230-2, 2014.
Human Rights
D. Botstein, Lasker∼Koshland to genetics pioneer., Cell, vol. 158, no. 6, pp. 1230-2, 2014.
Immunoglobulin Heavy Chains
S. M. Tilghman, Lessons learned, promises kept: a biologist's eye view of the Genome Project., Genome Res, vol. 6, no. 9, pp. 773-80, 1996.
Lasers
J. W. Shaevitz and Fletcher, D. A., Load fluctuations drive actin network growth., Proc Natl Acad Sci U S A, vol. 104, no. 40, pp. 15688-92, 2007.

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