Publications Search Advanced Filters Type - Any -Journal Article Year - Any -2022202120202019201820172016201520142013201220112010200920082007200620052004200320022001200019991998199719961995199419931992199119901989198819871986198519841982198119801979197819771976 AuthorTitleTypeYear #ABCDEFGHIJKLMNOPQRSTUVWXYZ 60 Publications Applied Filters: First Letter Of Last Name: K Reset K 1.Kaletsky R, Murphy CT. The role of insulin/IGF-like signaling in C. elegans longevity and aging. Dis Model Mech. 2010;3(7-8):415–9. 1.Kaletsky R, Lakhina V, Arey R, Williams A, Landis J, Ashraf JM, Murphy CT. The C. elegans adult neuronal IIS/FOXO transcriptome reveals adult phenotype regulators. Nature. 2016;529(7584):92–6. PMCID: PMC4708089 1.Kaletsky R, Yao V, Williams A, Runnels AM, Tadych A, Zhou S, Troyanskaya OG, Murphy CT. Transcriptome analysis of adult Caenorhabditis elegans cells reveals tissue-specific gene and isoform expression. PLoS Genetics. 2018;14(8):e1007559. 1.Kamphorst JJ, Chung MK, Fan J, Rabinowitz JD. Quantitative analysis of acetyl-CoA production in hypoxic cancer cells reveals substantial contribution from acetate. Cancer Metab. 2014;2:23. 1.Kamphorst JJ, Fan J, Lu W, White E, Rabinowitz JD. Liquid chromatography-high resolution mass spectrometry analysis of fatty acid metabolism. Anal Chem. 2011;83(23):9114–22. 1.Kamphorst JJ, Cross JR, Fan J, de Stanchina E, Mathew R, White EP, Thompson CB, Rabinowitz JD. Hypoxic and Ras-transformed cells support growth by scavenging unsaturated fatty acids from lysophospholipids. Proc Natl Acad Sci U S A. 2013;110(22):8882–7. 1.Kamphorst JJ, Nofal M, Commisso C, Hackett SR, Lu W, Grabocka E, Heiden MGV, Miller G, Drebin JA, Bar-Sagi D, Thompson CB, Rabinowitz JD. Human pancreatic cancer tumors are nutrient poor and tumor cells actively scavenge extracellular protein. Cancer Res. 2015;75(3):544–53. 1.Kanodia JS, Kim Y, Tomer R, Khan Z, Chung K, Storey JD, Lu H, Keller PJ, Shvartsman SY. A computational statistics approach for estimating the spatial range of morphogen gradients. Development. 2011;138(22):4867–74. 1.Kanodia JS, Liang H-L, Kim Y, Lim B, Zhan M, Lu H, Rushlow CA, Shvartsman SY. Pattern formation by graded and uniform signals in the early Drosophila embryo. Biophys J. 2012;102(3):427–33. 1.Kanodia JS, Rikhy R, Kim Y, Lund VK, DeLotto R, Lippincott-Schwartz J, Shvartsman SY. Dynamics of the Dorsal morphogen gradient. Proc Natl Acad Sci U S A. 2009;106(51):21707–12. 1.Kapheim KM, Pan H, Li C, Salzberg SL, Puiu D, Magoc T, Robertson HM, Hudson ME, Venkat A, Fischman BJ, Hernandez A, Yandell M, Ence D, Holt C, Yocum GD, Kemp WP, Bosch J, Waterhouse RM, Zdobnov EM, Stolle E, Kraus B, Helbing S, Moritz RFA, Glastad KM, Hunt BG, Goodisman MAD, Hauser F, Grimmelikhuijzen CJP, Pinheiro DG, Nunes FMF, Soares MPM, Tanaka Érica D, Simões ZLP, Hartfelder K, Evans JD, Barribeau SM, Johnson RM, Massey JH, Southey BR, Hasselmann M, Hamacher D, Biewer M, Kent CF, Zayed A, Blatti C, Sinha S, Johnston S, Hanrahan SJ, Kocher SD, Wang J, Robinson GE, Zhang G. Social evolution. Genomic signatures of evolutionary transitions from solitary to group living. Science. 2015;348(6239):1139–43. PMCID: PMC5471836 1.Karsli-Uzunbas G, Guo JY, Price S, Teng X, Laddha S V, Khor S, Kalaany NY, Jacks T, Chan CS, Rabinowitz JD, White E. Autophagy is required for glucose homeostasis and lung tumor maintenance. Cancer Discov. 2014;4(8):914–27. 1.Käss S, Gregor T, Kersting B. Diels-Alder reactivity of binuclear complexes with calixarene-like structures. Angew Chem Int Ed Engl. 2005;45(1):101–4. 1.Kathe C, Skinnider M, Hutson T, Regazzi N, Gautier M, Demesmaeker R, Komi S, Ceto S, James N, Cho N, Baud L, Galan K, Matson K, Rowald A, Kim K, Wang R, Minassian K, Prior J, Asboth L, Barraud Q, Lacour S, Levine A, Wagner F, Bloch J, Squair J, Courtine G. The neurons that restore walking after paralysis. Nature. 2022;611(7936):540–547. PMCID: PMC9668750 1.Katz DJ, Beer MA, Levorse JM, Tilghman SM. Functional characterization of a novel Ku70/80 pause site at the H19/Igf2 imprinting control region. Mol Cell Biol. 2005;25(10):3855–63. 1.Kauffman A, Parsons L, Stein G, Wills A, Kaletsky R, Murphy C. C. elegans positive butanone learning, short-term, and long-term associative memory assays. Journal of visualized experiments : JoVE. 2011;(49). PMCID: PMC3197297 1.Kauffman AL, Ashraf JM, Corces-Zimmerman R, Landis JN, Murphy CT. Insulin signaling and dietary restriction differentially influence the decline of learning and memory with age. PLoS Biol. 2010;8(5):e1000372. 1.Kavousanakis ME, Kanodia JS, Kim Y, Kevrekidis IG, Shvartsman SY. A compartmental model for the bicoid gradient. Dev Biol. 2010;345(1):12–7. 1.Kelly RC, Bolitho ME, Higgins DA, Lu W, Ng W-L, Jeffrey PD, Rabinowitz JD, Semmelhack MF, Hughson FM, Bassler BL. The Vibrio cholerae quorum-sensing autoinducer CAI-1: analysis of the biosynthetic enzyme CqsA. Nat Chem Biol. 2009;5(12):891–5. 1.Kenyon C, Murphy CT. Enrichment of regulatory motifs upstream of predicted DAF-16 targets. Nat Genet. 2006;38(4):397–8; author reply 398. 1.Keymer JE, Endres RG, Skoge M, Meir Y, Wingreen NS. Chemosensing in Escherichia coli: two regimes of two-state receptors. Proc Natl Acad Sci U S A. 2006;103(6):1786–91. 1.Keys DN, Levine M, Harland RM, Wallingford JB. Control of intercalation is cell-autonomous in the notochord of Ciona intestinalis. Dev Biol. 2002;246(2):329–40. 1.Khan Z, Bloom JS, Amini S, Singh M, Perlman DH, Caudy AA, Kruglyak L. Quantitative measurement of allele-specific protein expression in a diploid yeast hybrid by LC-MS. Mol Syst Biol. 2012;8:602. 1.Khan Z, Wang Y-C, Wieschaus EF, Kaschube M. Quantitative 4D analyses of epithelial folding during Drosophila gastrulation. Development. 2014;141(14):2895–900. 1.Khan Z, Bloom JS, Garcia BA, Singh M, Kruglyak L. Protein quantification across hundreds of experimental conditions. Proc Natl Acad Sci U S A. 2009;106(37):15544–8. 1.Khan Z, Bloom JS, Kruglyak L, Singh M. A practical algorithm for finding maximal exact matches in large sequence datasets using sparse suffix arrays. Bioinformatics. 2009;25(13):1609–16. 1.Khan Z, Amini S, Bloom JS, Ruse C, Caudy AA, Kruglyak L, Singh M, Perlman DH, Tavazoie S. Accurate proteome-wide protein quantification from high-resolution 15N mass spectra. Genome Biol. 2011;12(12):R122. 1.Kidd PB, Wingreen NS. Modeling the role of covalent enzyme modification in Escherichia coli nitrogen metabolism. Phys Biol. 2010;7(1):016006. 1.Kim Y, Paroush Z, Nairz K, Hafen E, Jiménez G, Shvartsman SY. Substrate-dependent control of MAPK phosphorylation in vivo. Mol Syst Biol. 2011;7:467. 1.Kim Y, Coppey M, Grossman R, Ajuria L, Jiménez G, Paroush Z, Shvartsman SY. MAPK substrate competition integrates patterning signals in the Drosophila embryo. Curr Biol. 2010;20(5):446–51. 1.Kim Y, Andreu MJ, Lim B, Chung K, Terayama M, Jiménez G, Berg CA, Lu H, Shvartsman SY. Gene regulation by MAPK substrate competition. Dev Cell. 2011;20(6):880–7. 1.Kim Y, Iagovitina A, Ishihara K, Fitzgerald KM, Deplancke B, Papatsenko D, Shvartsman SY. Context-dependent transcriptional interpretation of mitogen activated protein kinase signaling in the Drosophila embryo. Chaos. 2013;23(2):025105. 1.Kim J, Ghasemzadeh N, Eapen DJ, Chung NC, Storey JD, Quyyumi AA, Gibson G. Gene expression profiles associated with acute myocardial infarction and risk of cardiovascular death. Genome Med. 2014;6(5):40. 1.Kim HI, Raffler J, Lu W, Lee J-J, Abbey D, Saleheen D, Rabinowitz JD, Bennett MJ, Hand NJ, Brown C, Rader DJ. Fine Mapping and Functional Analysis Reveal a Role of SLC22A1 in Acylcarnitine Transport. Am J Hum Genet. 2017;101(4):489–502. PMCID: PMC5630162 1.Kimball E, Rabinowitz JD. Identifying decomposition products in extracts of cellular metabolites. Anal Biochem. 2006;358(2):273–80. 1.King S, Singh M. Comparative genomic analysis reveals varying levels of mammalian adaptation to coronavirus infections. PLoS computational biology. 2021;17(11):e1009560. PMCID: PMC8601562 1.Kingsford CL, Chazelle B, Singh M. Solving and analyzing side-chain positioning problems using linear and integer programming. Bioinformatics. 2005;21(7):1028–36. 1.Klein DE, Nappi VM, Reeves GT, Shvartsman SY, Lemmon MA. Argos inhibits epidermal growth factor receptor signalling by ligand sequestration. Nature. 2004;430(7003):1040–4. 1.Klibaite U, Berman GJ, Cande JD, Stern DL, Shaevitz JW. An unsupervised method for quantifying the behavior of paired animals. Phys Biol. 2017;14(1):015006. PMCID: PMC5414632 1.Kliegman JI, Fiedler D, Ryan CJ, Xu Y-F, Su X-Y, Thomas D, Caccese MC, Cheng A, Shales M, Rabinowitz JD, Krogan NJ, Shokat KM. Chemical genetics of rapamycin-insensitive TORC2 in S. cerevisiae. Cell Rep. 2013;5(6):1725–36. 1.Klosinska MM, Crutchfield CA, Bradley PH, Rabinowitz JD, Broach JR. Yeast cells can access distinct quiescent states. Genes Dev. 2011;25(4):336–49. 1.Kobren SN, Singh M. Systematic domain-based aggregation of protein structures highlights DNA-, RNA- and other ligand-binding positions. Nucleic Acids Res. 2019;47(2):582–593. PMCID: PMC6344845 1.Koch MD, Shaevitz JW. Introduction to Optical Tweezers. Methods Mol Biol. 2017;1486:3–24. PMID: 27844423 1.Kocher S, Pellissier L, Veller C, Purcell J, Nowak M, Chapuisat M, Pierce N. Transitions in social complexity along elevational gradients reveal a combined impact of season length and development time on social evolution. Proceedings. Biological sciences. 2014;281(1787). PMCID: PMC4071548 1.Kocher S, Li C, Yang W, Tan H, Yi S V, Yang X, Hoekstra H, Zhang G, Pierce N, Yu D. The draft genome of a socially polymorphic halictid bee, Lasioglossum albipes. Genome biology. 2013;14(12):R142. PMCID: PMC4062844 1.Kocher SD, Ayroles J, Stone EA, Grozinger CM. Individual variation in pheromone response correlates with reproductive traits and brain gene expression in worker honey bees. PLoS One. 2010;5(2):e9116. 1.Kocher SD, Tsuruda JM, Gibson JD, Emore CM, Arechavaleta-Velasco ME, Queller DC, Strassmann JE, Grozinger CM, Gribskov MR, San Miguel P, Westerman R, Hunt GJ. A Search for Parent-of-Origin Effects on Honey Bee Gene Expression. G3 (Bethesda). 2015;5(8):1657–62. PMCID: PMC4528322 1.Koivunen P, Fell SM, Lu W, Rabinowitz JD, Kung AL, Schlisio S. The 2-oxoglutarate analog 3-oxoglutarate decreases normoxic hypoxia-inducible factor-1α in cancer cells, induces cell death, and reduces tumor xenograft growth. Hypoxia (Auckl). 2016;4:15–27. PMCID: PMC4981084 1.Konopacki C, Pritykin Y, Rubtsov Y, Leslie C, Rudensky A. Transcription factor Foxp1 regulates Foxp3 chromatin binding and coordinates regulatory T cell function. Nature immunology. 2019;20(2):232–242. PMCID: PMC7534899 1.Koyuncu E, Purdy JG, Rabinowitz JD, Shenk T. Saturated very long chain fatty acids are required for the production of infectious human cytomegalovirus progeny. PLoS Pathog. 2013;9(5):e1003333. Pagination Current page 1 Page 2 Next page Next › Last page Last »