Transcriptional Basis of Mouse and Human Dendritic Cell Heterogeneity. Author Chrysothemis Brown, Herman Gudjonson, Yuri Pritykin, Deeksha Deep, Vincent-Philippe Lavallée, Alejandra Mendoza, Rachel Fromme, Linas Mazutis, Charlotte Ariyan, Christina Leslie, Dana Pe'er, Alexander Rudensky Publication Year 2019 Type Journal Article Abstract Dendritic cells (DCs) play a critical role in orchestrating adaptive immune responses due to their unique ability to initiate T cell responses and direct their differentiation into effector lineages. Classical DCs have been divided into two subsets, cDC1 and cDC2, based on phenotypic markers and their distinct abilities to prime CD8 and CD4 T cells. While the transcriptional regulation of the cDC1 subset has been well characterized, cDC2 development and function remain poorly understood. By combining transcriptional and chromatin analyses with genetic reporter expression, we identified two principal cDC2 lineages defined by distinct developmental pathways and transcriptional regulators, including T-bet and RORγt, two key transcription factors known to define innate and adaptive lymphocyte subsets. These novel cDC2 lineages were characterized by distinct metabolic and functional programs. Extending our findings to humans revealed conserved DC heterogeneity and the presence of the newly defined cDC2 subsets in human cancer. Keywords ATAC-sequencing, T-bet, dendritic cells, myeloid cells, single-cell RNA-sequencing, transcriptional regulation Journal Cell Volume 179 Issue 4 Pages 846-863.e24 Date Published 10/2019 ISSN Number 1097-4172 DOI 10.1016/j.cell.2019.09.035 Alternate Journal Cell PMCID PMC6838684 PMID 31668803 PubMedPubMed CentralGoogle ScholarBibTeXEndNote X3 XML