NetGrep: fast network schema searches in interactomes. Author Eric Banks, Elena Nabieva, Ryan Peterson, Mona Singh Publication Year 2008 Type Journal Article Abstract NetGrep (http://genomics.princeton.edu/singhlab/netgrep/) is a system for searching protein interaction networks for matches to user-supplied 'network schemas'. Each schema consists of descriptions of proteins (for example, their molecular functions or putative domains) along with the desired topology and types of interactions among them. Schemas can thus describe domain-domain interactions, signaling and regulatory pathways, or more complex network patterns. NetGrep provides an advanced graphical interface for specifying schemas and fast algorithms for extracting their matches. Keywords Animals, Humans, Algorithms, Protein Interaction Mapping Journal Genome Biol Volume 9 Issue 9 Pages R138 Alternate Journal Genome Biol. Google ScholarBibTeXEndNote X3 XML