Slotte, Tanja, Khaled M Hazzouri, David Stern, Peter Andolfatto, and Stephen I Wright. (2012) 2012. “Genetic Architecture and Adaptive Significance of the Selfing Syndrome in Capsella.”. Evolution 66 (5): 1360-74. Reference Link
Guan, Yuanfang, Cheryl L Ackert-Bicknell, Braden Kell, Olga G Troyanskaya, and Matthew A Hibbs. 2010. “Functional Genomics Complements Quantitative Genetics in Identifying Disease-Gene Associations.”. PLoS Comput Biol 6 (11): e1000991. Reference Link
Cande, Jessica Doran, Peter Andolfatto, Benjamin Prud’homme, David L Stern, and Nicolas Gompel. 2012. “Evolution of Multiple Additive Loci Caused Divergence Between Drosophila Yakuba and D. Santomea in Wing Rowing During Male Courtship.”. PLoS One 7 (8): e43888. Reference Link
Mackay, Trudy F C, Stephen Richards, Eric A Stone, Antonio Barbadilla, Julien Ayroles, Dianhui Zhu, Sònia Casillas, et al. (2012) 2012. “The Drosophila Melanogaster Genetic Reference Panel.”. Nature 482 (7384): 173-8. Reference Link
Zhou, Jian, Chandra L Theesfeld, Kevin Yao, Kathleen M Chen, Aaron K Wong, and Olga G Troyanskaya. (2018) 2018. “Deep Learning Sequence-Based Ab Initio Prediction of Variant Effects on Expression and Disease Risk.”. Nat Genet 50 (8): 1171-79. doi:10.1038/s41588-018-0160-6. Reference Link
Ober, Ulrike, Julien Ayroles, Eric A Stone, Stephen Richards, Dianhui Zhu, Richard A Gibbs, Christian Stricker, et al. 2012. “Using Whole-Genome Sequence Data to Predict Quantitative Trait Phenotypes in Drosophila Melanogaster.”. PLoS Genet 8 (5): e1002685. Reference Link
Jumbo-Lucioni, Patricia, Julien Ayroles, Michelle Chambers, Katherine W Jordan, Jeff Leips, Trudy Fc Mackay, and Maria De Luca. 2010. “Systems Genetics Analysis of Body Weight and Energy Metabolism Traits in Drosophila Melanogaster.”. BMC Genomics 11: 297. Reference Link
Goodliffe, Julie M, Eric Wieschaus, and Michael D Cole. (2005) 2005. “Polycomb Mediates Myc Autorepression and Its Transcriptional Control of Many Loci in Drosophila.”. Genes Dev 19 (24): 2941-6. Reference Link
Andolfatto, Peter, Dan Davison, Deniz Erezyilmaz, Tina T Hu, Joshua Mast, Tomoko Sunayama-Morita, and David L Stern. (2011) 2011. “Multiplexed Shotgun Genotyping for Rapid and Efficient Genetic Mapping.”. Genome Res 21 (4): 610-7. Reference Link
Haddrill, Penelope R, Kevin R Thornton, Brian Charlesworth, and Peter Andolfatto. (2005) 2005. “Multilocus Patterns of Nucleotide Variability and the Demographic and Selection History of Drosophila Melanogaster Populations.”. Genome Res 15 (6): 790-9. Reference Link
Massouras, Andreas, Sebastian M Waszak, Monica Albarca-Aguilera, Korneel Hens, Wiebke Holcombe, Julien Ayroles, Emmanouil T Dermitzakis, et al. 2012. “Genomic Variation and Its Impact on Gene Expression in Drosophila Melanogaster.”. PLoS Genet 8 (11): e1003055. Reference Link
Breunig, Jeffrey S, Sean R Hackett, Joshua D Rabinowitz, and Leonid Kruglyak. (2014) 2014. “Genetic Basis of Metabolome Variation in Yeast.”. PLoS Genet 10 (3): e1004142. Reference Link