Kingsford, Carleton L, Bernard Chazelle, and Mona Singh. (2005) 2005. “Solving and Analyzing Side-Chain Positioning Problems Using Linear and Integer Programming.”. Bioinformatics 21 (7): 1028-36. Reference Link
Lenz, Derrick H, Kenny C Mok, Brendan N Lilley, Rahul Kulkarni V, Ned S Wingreen, and Bonnie L Bassler. (2004) 2004. “The Small RNA Chaperone Hfq and Multiple Small RNAs Control Quorum Sensing in Vibrio Harveyi and Vibrio Cholerae.”. Cell 118 (1): 69-82. Reference Link
Fong, Jessica H, Amy E Keating, and Mona Singh. 2004. “Predicting Specificity in BZIP Coiled-Coil Protein Interactions.”. Genome Biol 5 (2): R11. Reference Link
Kruus, Erik, Peter Thumfort, Chao Tang, and Ned S Wingreen. 2005. “Gibbs Sampling and Helix-Cap Motifs.”. Nucleic Acids Res 33 (16): 5343-53. Reference Link
Emberly, Eldon G, Ranjan Mukhopadhyay, Chao Tang, and Ned S Wingreen. (2004) 2004. “Flexibility of Beta-Sheets: Principal Component Analysis of Database Protein Structures.”. Proteins 55 (1): 91-8. Reference Link
Emberly, Eldon G, Ranjan Mukhopadhyay, Ned S Wingreen, and Chao Tang. (2003) 2003. “Flexibility of Alpha-Helices: Results of a Statistical Analysis of Database Protein Structures.”. J Mol Biol 327 (1): 229-37. Reference Link
Emberly, Eldon G, Ned S Wingreen, and Chao Tang. (2002) 2002. “Designability of Alpha-Helical Proteins.”. Proc Natl Acad Sci U S A 99 (17): 11163-8. Reference Link
