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Zhen, Ying, and Peter Andolfatto. 2012. “Methods to Detect Selection on Noncoding DNA.”. Methods Mol Biol 856: 141-59.

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Aardema, Matthew L, Ying Zhen, and Peter Andolfatto. (2012) 2012. “The Evolution of Cardenolide-Resistant Forms of Na⁺,K⁺ -ATPase in Danainae Butterflies.”. Mol Ecol 21 (2): 340-9.

Andolfatto, Peter, Karen M Wong, and Doris Bachtrog. 2011. “Effective Population Size and the Efficacy of Selection on the X Chromosomes of Two Closely Related Drosophila Species.”. Genome Biol Evol 3: 114-28.

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Jensen, Jeffrey D, Kevin R Thornton, and Peter Andolfatto. 2008. “An Approximate Bayesian Estimator Suggests Strong, Recurrent Selective Sweeps in Drosophila.”. PLoS Genet 4 (9): e1000198.

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