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  • Trinklein, Nathan D, John I Murray, Sara J Hartman, David Botstein, and Richard M Myers. (2004) 2004. “The Role of Heat Shock Transcription Factor 1 in the Genome-Wide Regulation of the Mammalian Heat Shock Response.”. Mol Biol Cell 15 (3): 1254-61.
    Reference Link
  • Caspary, T, M A Cleary, E J Perlman, P Zhang, S J Elledge, and S M Tilghman. (1999) 1999. “Oppositely Imprinted Genes p57(Kip2) and Igf2 Interact in a Mouse Model for Beckwith-Wiedemann Syndrome.”. Genes Dev 13 (23): 3115-24.
    Reference Link
  • Wong, Aaron K, Christopher Y Park, Casey S Greene, Lars A Bongo, Yuanfang Guan, and Olga G Troyanskaya. (2012) 2012. “IMP: A Multi-Species Functional Genomics Portal for Integration, Visualization and Prediction of Protein Functions and Networks.”. Nucleic Acids Res 40 (Web Server issue).
    Reference Link
  • Bowman, Aaron B, John M Levorse, Robert S Ingram, and Shirley M Tilghman. (2003) 2003. “Functional Characterization of a Testis-Specific DNA Binding Activity at the H19 Igf2 Imprinting Control Region.”. Mol Cell Biol 23 (22): 8345-51.
    Reference Link
  • Mancini-Dinardo, Debora, Scott J S Steele, Robert S Ingram, and Shirley M Tilghman. (2003) 2003. “A Differentially Methylated Region Within the Gene Kcnq1 Functions As an Imprinted Promoter and Silencer.”. Hum Mol Genet 12 (3): 283-94.
    Reference Link
  • Lu, Wenyun, Xiaoyang Su, Matthias S Klein, Ian A Lewis, Oliver Fiehn, and Joshua D Rabinowitz. (2017) 2017. “Metabolite Measurement: Pitfalls to Avoid and Practices to Follow.”. Annu Rev Biochem 86: 277-304. doi:10.1146/annurev-biochem-061516-044952.
    Reference Link
  • Spear, B T, and S M Tilghman. (1990) 1990. “Role of Alpha-Fetoprotein Regulatory Elements in Transcriptional Activation in Transient Heterokaryons.”. Mol Cell Biol 10 (10): 5047-54.
    Reference Link
  • Tyner, A L, R Godbout, R S Compton, and S M Tilghman. (1990) 1990. “The Ontogeny of Alpha-Fetoprotein Gene Expression in the Mouse Gastrointestinal Tract.”. J Cell Biol 110 (4): 915-27.
    Reference Link
  • Jones, B K, J M Levorse, and S M Tilghman. (1998) 1998. “Igf2 Imprinting Does Not Require Its Own DNA Methylation or H19 RNA.”. Genes Dev 12 (14): 2200-7.
    Reference Link
  • Katz, David J, Michael A Beer, John M Levorse, and Shirley M Tilghman. (2005) 2005. “Functional Characterization of a Novel Ku70 80 Pause Site at the H19 Igf2 Imprinting Control Region.”. Mol Cell Biol 25 (10): 3855-63.
    Reference Link
  • Jones, B K, J Levorse, and S M Tilghman. (2001) 2001. “Deletion of a Nuclease-Sensitive Region Between the Igf2 and H19 Genes Leads to Igf2 Misregulation and Increased Adiposity.”. Hum Mol Genet 10 (8): 807-14.
    Reference Link
  • Nofal, Michel, Kevin Zhang, Seunghun Han, and Joshua D Rabinowitz. (2017) 2017. “MTOR Inhibition Restores Amino Acid Balance in Cells Dependent on Catabolism of Extracellular Protein.”. Mol Cell 67 (6): 936-946.e5. doi:10.1016/j.molcel.2017.08.011.
    Reference Link
  • Emerson, J A, J Vacher, L A Cirillo, S M Tilghman, and A L Tyner. (1992) 1992. “The Zonal Expression of Alpha-Fetoprotein Transgenes in the Livers of Adult Mice.”. Dev Dyn 195 (1): 55-66.
    Reference Link
  • Vacher, J, S A Camper, R Krumlauf, R S Compton, and S M Tilghman. (1992) 1992. “Raf Regulates the Postnatal Repression of the Mouse Alpha-Fetoprotein Gene at the Posttranscriptional Level.”. Mol Cell Biol 12 (2): 856-64.
    Reference Link
  • Armand, P, A C Knapp, A J Hirsch, E F Wieschaus, and M D Cole. (1994) 1994. “A Novel Basic Helix-Loop-Helix Protein Is Expressed in Muscle Attachment Sites of the Drosophila Epidermis.”. Mol Cell Biol 14 (6): 4145-54.
    Reference Link
  • Pelham, Robert J, Linda Rodgers, Ira Hall, Robert Lucito, Ken C Q Nguyen, Nicholas Navin, James Hicks, et al. (2006) 2006. “Identification of Alterations in DNA Copy Number in Host Stromal Cells During Tumor Progression.”. Proc Natl Acad Sci U S A 103 (52): 19848-53.
    Reference Link
  • Godbout, R, R S Ingram, and S M Tilghman. (1988) 1988. “Fine-Structure Mapping of the Three Mouse Alpha-Fetoprotein Gene Enhancers.”. Mol Cell Biol 8 (3): 1169-78.
    Reference Link
  • Ju, Wenjun, Casey S Greene, Felix Eichinger, Viji Nair, Jeffrey B Hodgin, Markus Bitzer, Young-suk Lee, et al. (2013) 2013. “Defining Cell-Type Specificity at the Transcriptional Level in Human Disease.”. Genome Res 23 (11): 1862-73.
    Reference Link
  • Kim, Hye In, Johannes Raffler, Wenyun Lu, Jung-Jin Lee, Deepti Abbey, Danish Saleheen, Joshua D Rabinowitz, et al. (2017) 2017. “Fine Mapping and Functional Analysis Reveal a Role of SLC22A1 in Acylcarnitine Transport.”. Am J Hum Genet 101 (4): 489-502. doi:10.1016/j.ajhg.2017.08.008.
    Reference Link
  • Peifer, M, P D McCrea, K J Green, E Wieschaus, and B M Gumbiner. (1992) 1992. “The Vertebrate Adhesive Junction Proteins Beta-Catenin and Plakoglobin and the Drosophila Segment Polarity Gene Armadillo Form a Multigene Family With Similar Properties.”. J Cell Biol 118 (3): 681-91.
    Reference Link
  • Pavan, W J, S Mac, M Cheng, and S M Tilghman. (1995) 1995. “Quantitative Trait Loci That Modify the Severity of Spotting in Piebald Mice.”. Genome Res 5 (1): 29-41.
    Reference Link
  • Caspary, T, M A Cleary, C C Baker, X J Guan, and S M Tilghman. (1998) 1998. “Multiple Mechanisms Regulate Imprinting of the Mouse Distal Chromosome 7 Gene Cluster.”. Mol Cell Biol 18 (6): 3466-74.
    Reference Link
  • Kamphorst, Jurre J, Justin R Cross, Jing Fan, Elisa de Stanchina, Robin Mathew, Eileen P White, Craig B Thompson, and Joshua D Rabinowitz. (2013) 2013. “Hypoxic and Ras-Transformed Cells Support Growth by Scavenging Unsaturated Fatty Acids from Lysophospholipids.”. Proc Natl Acad Sci U S A 110 (22): 8882-7.
    Reference Link
  • Metallinos, D L, A J Oppenheimer, E M Rinchik, L B Russell, W Dietrich, and S M Tilghman. (1994) 1994. “Fine Structure Mapping and Deletion Analysis of the Murine Piebald Locus.”. Genetics 136 (1): 217-23.
    Reference Link
  • Hark, A T, C J Schoenherr, D J Katz, R S Ingram, J M Levorse, and S M Tilghman. (2000) 2000. “CTCF Mediates Methylation-Sensitive Enhancer-Blocking Activity at the H19 Igf2 Locus.”. Nature 405 (6785): 486-9.
    Reference Link
  • Bartlett, Thomas M, Benjamin P Bratton, Amit Duvshani, Amanda Miguel, Ying Sheng, Nicholas R Martin, Jeffrey P Nguyen, et al. (2017) 2017. “A Periplasmic Polymer Curves Vibrio Cholerae and Promotes Pathogenesis.”. Cell 168 (1-2): 172-185.e15. doi:10.1016/j.cell.2016.12.019.
    Reference Link
  • Novoradovskaya, Natalia, Michael L Whitfield, Lee S Basehore, Alexey Novoradovsky, Robert Pesich, Jerry Usary, Mehmet Karaca, et al. (2004) 2004. “Universal Reference RNA As a Standard for Microarray Experiments.”. BMC Genomics 5 (1): 20.
    Reference Link
  • Fan, Jing, Jiangbin Ye, Jurre J Kamphorst, Tomer Shlomi, Craig B Thompson, and Joshua D Rabinowitz. (2014) 2014. “Quantitative Flux Analysis Reveals Folate-Dependent NADPH Production.”. Nature 510 (7504): 298-302.
    Reference Link
  • Burke, D T, J M Rossi, J Leung, D S Koos, and S M Tilghman. 1991. “A Mouse Genomic Library of Yeast Artificial Chromosome Clones.”. Mamm Genome 1 (1): 65.
    Reference Link
  • Jones, Beverly K, John Levorse, and Shirley M Tilghman. (2002) 2002. “A Human H19 Transgene Exhibits Impaired Paternal-Specific Imprint Acquisition and Maintenance in Mice.”. Hum Mol Genet 11 (4): 411-8.
    Reference Link
  • Kurihara, L J, E Semenova, J M Levorse, and S M Tilghman. (2000) 2000. “Expression and Functional Analysis of Uch-L3 During Mouse Development.”. Mol Cell Biol 20 (7): 2498-504.
    Reference Link
  • Peña-Castillo, Lourdes, Murat Tasan, Chad L Myers, Hyunju Lee, Trupti Joshi, Chao Zhang, Yuanfang Guan, et al. 2008. “A Critical Assessment of Mus Musculus Gene Function Prediction Using Integrated Genomic Evidence.”. Genome Biol 9 Suppl 1: S2.
    Reference Link
  • Nirschl, Christopher J, Mayte Suárez-Fariñas, Benjamin Izar, Sanjay Prakadan, Ruth Dannenfelser, Itay Tirosh, Yong Liu, et al. (2017) 2017. “IFNγ-Dependent Tissue-Immune Homeostasis Is Co-Opted in the Tumor Microenvironment.”. Cell 170 (1): 127-141.e15. doi:10.1016/j.cell.2017.06.016.
    Reference Link
  • Yoo-Warren, H, , R S Ingram, and S M Tilghman. (1988) 1988. “Two Regulatory Domains Flank the Mouse H19 Gene.”. Mol Cell Biol 8 (11): 4707-15.
    Reference Link
  • Khan, Zia, Joshua S Bloom, Benjamin A Garcia, Mona Singh, and Leonid Kruglyak. (2009) 2009. “Protein Quantification across Hundreds of Experimental Conditions.”. Proc Natl Acad Sci U S A 106 (37): 15544-8.
    Reference Link
  • Shin, M K, L B Russell, and S M Tilghman. (1997) 1997. “Molecular Characterization of Four Induced Alleles at the Ednrb Locus.”. Proc Natl Acad Sci U S A 94 (24): 13105-10.
    Reference Link
  • Olszewski, Kellen L, Joanne M Morrisey, Daniel Wilinski, James M Burns, Akhil B Vaidya, Joshua D Rabinowitz, and Manuel Llinás. (2009) 2009. “Host-Parasite Interactions Revealed by Plasmodium Falciparum Metabolomics.”. Cell Host Microbe 5 (2): 191-9.
    Reference Link
  • Bartolomei, M S, A L Webber, M E Brunkow, and S M Tilghman. (1993) 1993. “Epigenetic Mechanisms Underlying the Imprinting of the Mouse H19 Gene.”. Genes Dev 7 (9): 1663-73.
    Reference Link
  • Calhoun, Vincent C, and Michael Levine. (2003) 2003. “Coordinate Regulation of an Extended Chromosome Domain.”. Cell 113 (3): 278-80.
    Reference Link
  • McKee, Sarah E, Sisi Zhang, Li Chen, Joshua D Rabinowitz, and Teresa M Reyes. (2018) 2018. “Perinatal High Fat Diet and Early Life Methyl Donor Supplementation Alter One Carbon Metabolism and DNA Methylation in the Brain.”. J Neurochem 145 (5): 362-73. doi:10.1111/jnc.14319.
    Reference Link
  • Vasicek, T J, L Zeng, X J Guan, T Zhang, F Costantini, and S M Tilghman. (1997) 1997. “Two Dominant Mutations in the Mouse Fused Gene Are the Result of Transposon Insertions.”. Genetics 147 (2): 777-86.
    Reference Link
  • Brannan, C I, E C Dees, R S Ingram, and S M Tilghman. (1990) 1990. “The Product of the H19 Gene May Function As an RNA.”. Mol Cell Biol 10 (1): 28-36.
    Reference Link
  • Millonig, J H, J A Emerson, J M Levorse, and S M Tilghman. (1995) 1995. “Molecular Analysis of the Distal Enhancer of the Mouse Alpha-Fetoprotein Gene.”. Mol Cell Biol 15 (7): 3848-56.
    Reference Link
  • Fan, Jing, Jurre J Kamphorst, Robin Mathew, Michelle K Chung, Eileen White, Tomer Shlomi, and Joshua D Rabinowitz. 2013. “Glutamine-Driven Oxidative Phosphorylation Is a Major ATP Source in Transformed Mammalian Cells in Both Normoxia and Hypoxia.”. Mol Syst Biol 9: 712.
    Reference Link
  • Leighton, P A, J R Saam, R S Ingram, C L Stewart, and S M Tilghman. (1995) 1995. “An Enhancer Deletion Affects Both H19 and Igf2 Expression.”. Genes Dev 9 (17): 2079-89.
    Reference Link
  • Godbout, R, and S M Tilghman. (1988) 1988. “Configuration of the Alpha-Fetoprotein Regulatory Domain During Development.”. Genes Dev 2 (8): 949-56.
    Reference Link
  • Lanaspa, Miguel A, Ana Andres-Hernando, David J Orlicky, Christina Cicerchi, Cholsoon Jang, Nanxing Li, Tamara Milagres, et al. (2018) 2018. “Ketohexokinase C Blockade Ameliorates Fructose-Induced Metabolic Dysfunction in Fructose-Sensitive Mice.”. J Clin Invest 128 (6): 2226-38. doi:10.1172/JCI94427.
    Reference Link
  • Feuerman, M H, R Godbout, R S Ingram, and S M Tilghman. (1989) 1989. “Tissue-Specific Transcription of the Mouse Alpha-Fetoprotein Gene Promoter Is Dependent on HNF-1.”. Mol Cell Biol 9 (10): 4204-12.
    Reference Link
  • Guan, Yuanfang, Chad L Myers, David C Hess, Zafer Barutcuoglu, Amy A Caudy, and Olga G Troyanskaya. 2008. “Predicting Gene Function in a Hierarchical Context With an Ensemble of Classifiers.”. Genome Biol 9 Suppl 1: S3.
    Reference Link
  • Tu, I-Ping, Marci Schaner, Maximilian Diehn, Branimir I Sikic, Patrick O Brown, David Botstein, and Michael J Fero. (2004) 2004. “A Method for Detecting and Correcting Feature Misidentification on Expression Microarrays.”. BMC Genomics 5: 64.
    Reference Link

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