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Vincent, A, J T Blankenship, and E Wieschaus. (1997) 1997. “Integration of the Head and Trunk Segmentation Systems Controls Cephalic Furrow Formation in Drosophila.”. Development 124 (19): 3747-54.

Rauskolb, C, and E Wieschaus. (1994) 1994. “Coordinate Regulation of Downstream Genes by Extradenticle and the Homeotic Selector Proteins.”. EMBO J 13 (15): 3561-9.

Boettiger, Alistair N, and Michael Levine. (2009) 2009. “Synchronous and Stochastic Patterns of Gene Activation in the Drosophila Embryo.”. Science 325 (5939): 471-3.

Senger, Kate, Grant W Armstrong, William J Rowell, Jennifer M Kwan, Michele Markstein, and Michael Levine. (2004) 2004. “Immunity Regulatory DNAs Share Common Organizational Features in Drosophila.”. Mol Cell 13 (1): 19-32.

Reeves, Gregory T, Rachel Kalifa, Daryl E Klein, Mark A Lemmon, and Stanislav Y Shvartsman. (2005) 2005. “Computational Analysis of EGFR Inhibition by Argos.”. Dev Biol 284 (2): 523-35.

Cowden, John, and Michael Levine. (2002) 2002. “The Snail Repressor Positions Notch Signaling in the Drosophila Embryo.”. Development 129 (7): 1785-93.

Morize, P, A E Christiansen, M Costa, S Parks, and E Wieschaus. (1998) 1998. “Hyperactivation of the Folded Gastrulation Pathway Induces Specific Cell Shape Changes.”. Development 125 (4): 589-97.

Papatsenko, Dmitri, Michael Levine, and Yury Goltsev. 2011. “Clusters of Temporal Discordances Reveal Distinct Embryonic Patterning Mechanisms in Drosophila and Anopheles.”. PLoS Biol 9 (1): e1000584.

Bejsovec, A, and E Wieschaus. (1995) 1995. “Signaling Activities of the Drosophila Wingless Gene Are Separately Mutable and Appear to Be Transduced at the Cell Surface.”. Genetics 139 (1): 309-20.

Markstein, Michele, Peter Markstein, Vicky Markstein, and Michael S Levine. (2002) 2002. “Genome-Wide Analysis of Clustered Dorsal Binding Sites Identifies Putative Target Genes in the Drosophila Embryo.”. Proc Natl Acad Sci U S A 99 (2): 763-8.

Bae, Esther, Vincent C Calhoun, Michael Levine, Edward B Lewis, and Robert A Drewell. (2002) 2002. “Characterization of the Intergenic RNA Profile at Abdominal-A and Abdominal-B in the Drosophila Bithorax Complex.”. Proc Natl Acad Sci U S A 99 (26): 16847-52.

Bejsovec, A, and E Wieschaus. (1993) 1993. “Segment Polarity Gene Interactions Modulate Epidermal Patterning in Drosophila Embryos.”. Development 119 (2): 501-17.

Grosshans, J, and E Wieschaus. (2000) 2000. “A Genetic Link Between Morphogenesis and Cell Division During Formation of the Ventral Furrow in Drosophila.”. Cell 101 (5): 523-31.

Irvine, K D, and E Wieschaus. (1994) 1994. “Cell Intercalation During Drosophila Germband Extension and Its Regulation by Pair-Rule Segmentation Genes.”. Development 120 (4): 827-41.

Zallen, Jennifer A, Yehudit Cohen, Andrew M Hudson, Lynn Cooley, Eric Wieschaus, and Eyal D Schejter. (2002) 2002. “SCAR Is a Primary Regulator of Arp2 3-Dependent Morphological Events in Drosophila.”. J Cell Biol 156 (4): 689-701.

Levine, Michael, and Eric H Davidson. (2005) 2005. “Gene Regulatory Networks for Development.”. Proc Natl Acad Sci U S A 102 (14): 4936-42.

Schejter, E D, and E Wieschaus. (1993) 1993. “Bottleneck Acts As a Regulator of the Microfilament Network Governing Cellularization of the Drosophila Embryo.”. Cell 75 (2): 373-85.

Helman, Aharon, Bomyi Lim, María José Andreu, Yoosik Kim, Tatyana Shestkin, Hang Lu, Gerardo Jiménez, Stanislav Y Shvartsman, and Ze’ev Paroush. (2012) 2012. “RTK Signaling Modulates the Dorsal Gradient.”. Development 139 (16): 3032-9.

Rauskolb, C, K M Smith, M Peifer, and E Wieschaus. (1995) 1995. “Extradenticle Determines Segmental Identities Throughout Drosophila Development.”. Development 121 (11): 3663-73.

Grimm, Oliver, and Eric Wieschaus. (2010) 2010. “The Bicoid Gradient Is Shaped Independently of Nuclei.”. Development 137 (17): 2857-62.

Papatsenko, Dmitri, and Michael Levine. (2005) 2005. “Quantitative Analysis of Binding Motifs Mediating Diverse Spatial Readouts of the Dorsal Gradient in the Drosophila Embryo.”. Proc Natl Acad Sci U S A 102 (14): 4966-71.

Berman, Benjamin P, Yutaka Nibu, Barret D Pfeiffer, Pavel Tomancak, Susan E Celniker, Michael Levine, Gerald M Rubin, and Michael B Eisen. (2002) 2002. “Exploiting Transcription Factor Binding Site Clustering to Identify Cis-Regulatory Modules Involved in Pattern Formation in the Drosophila Genome.”. Proc Natl Acad Sci U S A 99 (2): 757-62.

Müller, H A, and E Wieschaus. (1996) 1996. “Armadillo, Bazooka, and Stardust Are Critical for Early Stages in Formation of the Zonula Adherens and Maintenance of the Polarized Blastoderm Epithelium in Drosophila.”. J Cell Biol 134 (1): 149-63.

Calhoun, Vincent C, Angelike Stathopoulos, and Michael Levine. (2002) 2002. “Promoter-Proximal Tethering Elements Regulate Enhancer-Promoter Specificity in the Drosophila Antennapedia Complex.”. Proc Natl Acad Sci U S A 99 (14): 9243-7.

Huang, Wen, Stephen Richards, Mary Anna Carbone, Dianhui Zhu, Robert Anholt, Julien Ayroles, Laura Duncan, et al. (2012) 2012. “Epistasis Dominates the Genetic Architecture of Drosophila Quantitative Traits.”. Proc Natl Acad Sci U S A 109 (39): 15553-9.

Morozova, Tatiana, V, Julien Ayroles, Katherine W Jordan, Laura Duncan, Mary Anna Carbone, Richard F Lyman, Eric A Stone, et al. (2009) 2009. “Alcohol Sensitivity in Drosophila: Translational Potential of Systems Genetics.”. Genetics 183 (2): 733-45, 1SI.

Schupbach, T, and E Wieschaus. 1998. “Probing for Gene Specificity in Epithelial Development.”. Int J Dev Biol 42 (3): 249-55.

Hayashi, S, B Rubinfeld, B Souza, P Polakis, E Wieschaus, and A J Levine. (1997) 1997. “A Drosophila Homolog of the Tumor Suppressor Gene Adenomatous Polyposis Coli down-Regulates Beta-Catenin But Its Zygotic Expression Is Not Essential for the Regulation of Armadillo.”. Proc Natl Acad Sci U S A 94 (1): 242-7.

Wang, Qingqing, Matthew Taliaferro, Ugne Klibaite, Valérie Hilgers, Joshua W Shaevitz, and Donald C Rio. (2016) 2016. “The PSI-U1 SnRNP Interaction Regulates Male Mating Behavior in Drosophila.”. Proc Natl Acad Sci U S A 113 (19): 5269-74. doi:10.1073/pnas.1600936113.

Zallen, Jennifer A, and Eric Wieschaus. (2004) 2004. “Patterned Gene Expression Directs Bipolar Planar Polarity in Drosophila.”. Dev Cell 6 (3): 343-55.

Ahmed, Yashi, Ali Nouri, and Eric Wieschaus. (2002) 2002. “Drosophila Apc1 and Apc2 Regulate Wingless Transduction Throughout Development.”. Development 129 (7): 1751-62.

Haddrill, Penelope R, Kevin R Thornton, Brian Charlesworth, and Peter Andolfatto. (2005) 2005. “Multilocus Patterns of Nucleotide Variability and the Demographic and Selection History of Drosophila Melanogaster Populations.”. Genome Res 15 (6): 790-9.

De Renzis, Stefano, J Yu, R Zinzen, and Eric Wieschaus. (2006) 2006. “Dorsal-Ventral Pattern of Delta Trafficking Is Established by a Snail-Tom-Neuralized Pathway.”. Dev Cell 10 (2): 257-64.

Thornton, Kevin, Doris Bachtrog, and Peter Andolfatto. (2006) 2006. “X Chromosomes and Autosomes Evolve at Similar Rates in Drosophila: No Evidence for Faster-X Protein Evolution.”. Genome Res 16 (4): 498-504.

Postner, M A, K G Miller, and E F Wieschaus. (1992) 1992. “Maternal Effect Mutations of the Sponge Locus Affect Actin Cytoskeletal Rearrangements in Drosophila Melanogaster Embryos.”. J Cell Biol 119 (5): 1205-18.

Wang, Yu-Chiun, Zia Khan, and Eric F Wieschaus. (2013) 2013. “Distinct Rap1 Activity States Control the Extent of Epithelial Invagination via α-Catenin.”. Dev Cell 25 (3): 299-309.

Peifer, M, D Sweeton, M Casey, and E Wieschaus. (1994) 1994. “Wingless Signal and Zeste-White 3 Kinase Trigger Opposing Changes in the Intracellular Distribution of Armadillo.”. Development 120 (2): 369-80.

Shvartsman, Stanislav Y, Mathieu Coppey, and Alexander M Berezhkovskii. (2009) 2009. “MAPK Signaling in Equations and Embryos.”. Fly (Austin) 3 (1): 62-7.

Putnam, Andrea S, Mark Scriber, and Peter Andolfatto. (2007) 2007. “Discordant Divergence Times Among Z-Chromosome Regions Between Two Ecologically Distinct Swallowtail Butterfly Species.”. Evolution 61 (4): 912-27.

Stathopoulos, Angelike, and Michael Levine. (2002) 2002. “Whole-Genome Expression Profiles Identify Gene Batteries in Drosophila.”. Dev Cell 3 (4): 464-5.

Calhoun, Vincent C, and Michael Levine. (2003) 2003. “Long-Range Enhancer-Promoter Interactions in the Scr-Antp Interval of the Drosophila Antennapedia Complex.”. Proc Natl Acad Sci U S A 100 (17): 9878-83.

Markstein, Michele, and Michael Levine. (2002) 2002. “Decoding Cis-Regulatory DNAs in the Drosophila Genome.”. Curr Opin Genet Dev 12 (5): 601-6.

Blankenship, J T, and E Wieschaus. (2001) 2001. “Two New Roles for the Drosophila AP Patterning System in Early Morphogenesis.”. Development 128 (24): 5129-38.

Stathopoulos, Angelike, and Michael Levine. (2002) 2002. “Linear Signaling in the Toll-Dorsal Pathway of Drosophila: Activated Pelle Kinase Specifies All Threshold Outputs of Gene Expression While the BHLH Protein Twist Specifies a Subset.”. Development 129 (14): 3411-9.

Harbison, Susan T, Mary Anna Carbone, Julien Ayroles, Eric A Stone, Richard F Lyman, and Trudy F C Mackay. (2009) 2009. “Co-Regulated Transcriptional Networks Contribute to Natural Genetic Variation in Drosophila Sleep.”. Nat Genet 41 (3): 371-5.