Nabieva, Elena, Kam Jim, Amit Agarwal, Bernard Chazelle, and Mona Singh. (2005) 2005. “Whole-Proteome Prediction of Protein Function via Graph-Theoretic Analysis of Interaction Maps.”. Bioinformatics 21 Suppl 1.

Khan, Zia, Joshua S Bloom, Sasan Amini, Mona Singh, David H Perlman, Amy A Caudy, and Leonid Kruglyak. 2012. “Quantitative Measurement of Allele-Specific Protein Expression in a Diploid Yeast Hybrid by LC-MS.”. Mol Syst Biol 8: 602.

Khan, Zia, Joshua S Bloom, Benjamin A Garcia, Mona Singh, and Leonid Kruglyak. (2009) 2009. “Protein Quantification across Hundreds of Experimental Conditions.”. Proc Natl Acad Sci U S A 106 (37): 15544-8.

Fong, Jessica H, Amy E Keating, and Mona Singh. 2004. “Predicting Specificity in BZIP Coiled-Coil Protein Interactions.”. Genome Biol 5 (2): R11.

Caspary, T, M A Cleary, E J Perlman, P Zhang, S J Elledge, and S M Tilghman. (1999) 1999. “Oppositely Imprinted Genes p57(Kip2) and Igf2 Interact in a Mouse Model for Beckwith-Wiedemann Syndrome.”. Genes Dev 13 (23): 3115-24.

Guan, Yuanfang, Victoria Yao, Kyle Tsui, Marinella Gebbia, Maitreya Dunham, Corey Nislow, and Olga G Troyanskaya. 2011. “Nucleosome-Coupled Expression Differences in Closely-Related Species.”. BMC Genomics 12: 466.

Caudy, Amy A, Yuanfang Guan, Yue Jia, Christina Hansen, Chris DeSevo, Alicia P Hayes, Joy Agee, et al. (2013) 2013. “A New System for Comparative Functional Genomics of Saccharomyces Yeasts.”. Genetics 195 (1): 275-87.

Song, Jimin, and Mona Singh. 2013. “From Hub Proteins to Hub Modules: The Relationship Between Essentiality and Centrality in the Yeast Interactome at Different Scales of Organization.”. PLoS Comput Biol 9 (2): e1002910.

Heck, Julie Akiko, David Gresham, David Botstein, and Eric Alani. (2006) 2006. “Accumulation of Recessive Lethal Mutations in Saccharomyces Cerevisiae Mlh1 Mismatch Repair Mutants Is Not Associated With Gross Chromosomal Rearrangements.”. Genetics 174 (1): 519-23.