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Cheung, Lily S, David S A Simakov, Alisa Fuchs, George Pyrowolakis, and Stanislav Y Shvartsman. (2013) 2013. “Dynamic Model for the Coordination of Two Enhancers of Broad by EGFR Signaling.”. Proc Natl Acad Sci U S A 110 (44): 17939-44. Reference Link
Yakoby, Nir, Jessica Lembong, Trudi Schüpbach, and Stanislav Y Shvartsman. (2008) 2008. “Drosophila Eggshell Is Patterned by Sequential Action of Feedforward and Feedback Loops.”. Development 135 (2): 343-51. Reference Link
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Yan, Shian-Jang, Jeremiah J Zartman, Minjie Zhang, Anthony Scott, Stanislav Y Shvartsman, and Willis X Li. 2009. “Bistability Coordinates Activation of the EGFR and DPP Pathways in Drosophila Vein Differentiation.”. Mol Syst Biol 5: 278. Reference Link
Teng, Shu-Wen, Jessica N Schaffer, Kimberly C Tu, Pankaj Mehta, Wenyun Lu, N P Ong, Bonnie L Bassler, and Ned S Wingreen. (2011) 2011. “Active Regulation of Receptor Ratios Controls Integration of Quorum-Sensing Signals in Vibrio Harveyi.”. Mol Syst Biol 7: 491. Reference Link
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Song, Yonghyun, Robert A Marmion, Junyoung O Park, Debopriyo Biswas, Joshua D Rabinowitz, and Stanislav Y Shvartsman. (2017) 2017. “Dynamic Control of DNTP Synthesis in Early Embryos.”. Dev Cell 42 (3): 301-308.e3. doi:10.1016/j.devcel.2017.06.013. Reference Link
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Helman, Aharon, Bomyi Lim, María José Andreu, Yoosik Kim, Tatyana Shestkin, Hang Lu, Gerardo Jiménez, Stanislav Y Shvartsman, and Ze’ev Paroush. (2012) 2012. “RTK Signaling Modulates the Dorsal Gradient.”. Development 139 (16): 3032-9. Reference Link
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