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Stathopoulos, Angelike, Bergin Tam, Matthew Ronshaugen, Manfred Frasch, and Michael Levine. (2004) 2004. “Pyramus and Thisbe: FGF Genes That Pattern the Mesoderm of Drosophila Embryos.”. Genes Dev 18 (6): 687-99.

Lim, Bomyi, Núria Samper, Hang Lu, Christine Rushlow, Gerardo Jiménez, and Stanislav Y Shvartsman. (2013) 2013. “Kinetics of Gene Derepression by ERK Signaling.”. Proc Natl Acad Sci U S A 110 (25): 10330-5.

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Cowden, John, and Michael Levine. (2003) 2003. “Ventral Dominance Governs Sequential Patterns of Gene Expression across the Dorsal-Ventral Axis of the Neuroectoderm in the Drosophila Embryo.”. Dev Biol 262 (2): 335-49.

Gregor, Thomas, David W Tank, Eric F Wieschaus, and William Bialek. (2007) 2007. “Probing the Limits to Positional Information.”. Cell 130 (1): 153-64.

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Grimm, Oliver, and Eric Wieschaus. (2010) 2010. “The Bicoid Gradient Is Shaped Independently of Nuclei.”. Development 137 (17): 2857-62.

Blankenship, J T, and E Wieschaus. (2001) 2001. “Two New Roles for the Drosophila AP Patterning System in Early Morphogenesis.”. Development 128 (24): 5129-38.

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Liu, Feng, Alexander H Morrison, and Thomas Gregor. (2013) 2013. “Dynamic Interpretation of Maternal Inputs by the Drosophila Segmentation Gene Network.”. Proc Natl Acad Sci U S A 110 (17): 6724-9.

Abitua, Philip Barron, Blair Gainous, Angela N Kaczmarczyk, Christopher J Winchell, Clare Hudson, Kaori Kamata, Masashi Nakagawa, Motoyuki Tsuda, Takehiro G Kusakabe, and Michael Levine. (2015) 2015. “The Pre-Vertebrate Origins of Neurogenic Placodes.”. Nature 524 (7566): 462-5.

Pribyl, Michal, Cyrill B Muratov, and Stanislav Y Shvartsman. (2003) 2003. “Transitions in the Model of Epithelial Patterning.”. Dev Dyn 226 (1): 155-9.

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Farley, Emma, and Michael Levine. (2012) 2012. “HOT DNAs: A Novel Class of Developmental Enhancers.”. Genes Dev 26 (9): 873-6.

Papatsenko, Dmitri, and Michael S Levine. (2008) 2008. “Dual Regulation by the Hunchback Gradient in the Drosophila Embryo.”. Proc Natl Acad Sci U S A 105 (8): 2901-6.

Grimm, Oliver, Victoria Sanchez Zini, Yoosik Kim, Jordi Casanova, Stanislav Y Shvartsman, and Eric Wieschaus. (2012) 2012. “Torso RTK Controls Capicua Degradation by Changing Its Subcellular Localization.”. Development 139 (21): 3962-8.

Lembong, Jessica, Nir Yakoby, and Stanislav Y Shvartsman. (2009) 2009. “Pattern Formation by Dynamically Interacting Network Motifs.”. Proc Natl Acad Sci U S A 106 (9): 3213-8.

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Yakoby, Nir, Jessica Lembong, Trudi Schüpbach, and Stanislav Y Shvartsman. (2008) 2008. “Drosophila Eggshell Is Patterned by Sequential Action of Feedforward and Feedback Loops.”. Development 135 (2): 343-51.

Rushlow, Christine A, and Stanislav Y Shvartsman. (2012) 2012. “Temporal Dynamics, Spatial Range, and Transcriptional Interpretation of the Dorsal Morphogen Gradient.”. Curr Opin Genet Dev 22 (6): 542-6.

Zartman, Jeremiah J, Lily S Cheung, Matthew G Niepielko, Christine Bonini, Benjamin Haley, Nir Yakoby, and Stanislav Y Shvartsman. (2011) 2011. “Pattern Formation by a Moving Morphogen Source.”. Phys Biol 8 (4): 045003.

Levine, Michael, and Eric H Davidson. (2005) 2005. “Gene Regulatory Networks for Development.”. Proc Natl Acad Sci U S A 102 (14): 4936-42.

De Renzis, Stefano, J Yu, R Zinzen, and Eric Wieschaus. (2006) 2006. “Dorsal-Ventral Pattern of Delta Trafficking Is Established by a Snail-Tom-Neuralized Pathway.”. Dev Cell 10 (2): 257-64.

Gregor, Thomas, Eric F Wieschaus, Alistair P McGregor, William Bialek, and David W Tank. (2007) 2007. “Stability and Nuclear Dynamics of the Bicoid Morphogen Gradient.”. Cell 130 (1): 141-52.

Coppey, Mathieu, Alistair N Boettiger, Alexander M Berezhkovskii, and Stanislav Y Shvartsman. (2008) 2008. “Nuclear Trapping Shapes the Terminal Gradient in the Drosophila Embryo.”. Curr Biol 18 (12): 915-9.

Little, Shawn C, Gašper Tkačik, Thomas B Kneeland, Eric F Wieschaus, and Thomas Gregor. (2011) 2011. “The Formation of the Bicoid Morphogen Gradient Requires Protein Movement from Anteriorly Localized MRNA.”. PLoS Biol 9 (3): e1000596.

Stathopoulos, Angelike, and Michael Levine. (2002) 2002. “Dorsal Gradient Networks in the Drosophila Embryo.”. Dev Biol 246 (1): 57-67.

Bothma, Jacques P, Joe Magliocco, and Michael Levine. (2011) 2011. “The Snail Repressor Inhibits Release, Not Elongation, of Paused Pol II in the Drosophila Embryo.”. Curr Biol 21 (18): 1571-7.

Stolfi, Alberto, Eileen Wagner, Matthew Taliaferro, Seemay Chou, and Michael Levine. (2011) 2011. “Neural Tube Patterning by Ephrin, FGF and Notch Signaling Relays.”. Development 138 (24): 5429-39.

Dawes-Hoang, Rachel E, Kush M Parmar, Audrey E Christiansen, Chris B Phelps, Andrea H Brand, and Eric F Wieschaus. (2005) 2005. “Folded Gastrulation, Cell Shape Change and the Control of Myosin Localization.”. Development 132 (18): 4165-78.

Pribyl, Michal, Cyrill B Muratov, and Stanislav Y Shvartsman. (2003) 2003. “Discrete Models of Autocrine Cell Communication in Epithelial Layers.”. Biophys J 84 (6): 3624-35.

Gregor, Thomas, Alistair P McGregor, and Eric F Wieschaus. (2008) 2008. “Shape and Function of the Bicoid Morphogen Gradient in Dipteran Species With Different Sized Embryos.”. Dev Biol 316 (2): 350-8.

Sample, Christine, and Stanislav Y Shvartsman. (2010) 2010. “Multiscale Modeling of Diffusion in the Early Drosophila Embryo.”. Proc Natl Acad Sci U S A 107 (22): 10092-6.

Abouchar, Laurent, Mariela D Petkova, Cynthia R Steinhardt, and Thomas Gregor. (2014) 2014. “Fly Wing Vein Patterns Have Spatial Reproducibility of a Single Cell.”. J R Soc Interface 11 (97): 20140443.

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Hong, Joung-Woo, David A Hendrix, and Michael S Levine. (2008) 2008. “Shadow Enhancers As a Source of Evolutionary Novelty.”. Science 321 (5894): 1314.

Perry, Michael W, Alistair N Boettiger, and Michael Levine. (2011) 2011. “Multiple Enhancers Ensure Precision of Gap Gene-Expression Patterns in the Drosophila Embryo.”. Proc Natl Acad Sci U S A 108 (33): 13570-5.

Wagner, Eileen, and Michael Levine. (2012) 2012. “FGF Signaling Establishes the Anterior Border of the Ciona Neural Tube.”. Development 139 (13): 2351-9.

Bothma, Jacques P, and Michael Levine. (2013) 2013. “Development: Lights, Camera, Action--the Drosophila Embryo Goes Live!”. Curr Biol 23 (21).

Helman, Aharon, Bomyi Lim, María José Andreu, Yoosik Kim, Tatyana Shestkin, Hang Lu, Gerardo Jiménez, Stanislav Y Shvartsman, and Ze’ev Paroush. (2012) 2012. “RTK Signaling Modulates the Dorsal Gradient.”. Development 139 (16): 3032-9.

Coppey, Mathieu, Alexander M Berezhkovskii, Yoosik Kim, Alistair N Boettiger, and Stanislav Y Shvartsman. (2007) 2007. “Modeling the Bicoid Gradient: Diffusion and Reversible Nuclear Trapping of a Stable Protein.”. Dev Biol 312 (2): 623-30.

Zartman, Jeremiah J, Jitendra S Kanodia, Lily S Cheung, and Stanislav Y Shvartsman. (2009) 2009. “Feedback Control of the EGFR Signaling Gradient: Superposition of Domain-Splitting Events in Drosophila Oogenesis.”. Development 136 (17): 2903-11.

Markstein, Michele, and Michael Levine. (2002) 2002. “Decoding Cis-Regulatory DNAs in the Drosophila Genome.”. Curr Opin Genet Dev 12 (5): 601-6.

Chopra, Vivek S, Joung-Woo Hong, and Michael Levine. (2009) 2009. “Regulation of Hox Gene Activity by Transcriptional Elongation in Drosophila.”. Curr Biol 19 (8): 688-93.

Shvartsman, Stanislav Y, Cyrill B Muratov, and Douglas A Lauffenburger. (2002) 2002. “Modeling and Computational Analysis of EGF Receptor-Mediated Cell Communication in Drosophila Oogenesis.”. Development 129 (11): 2577-89.

Zartman, Jeremiah J, Jitendra S Kanodia, Nir Yakoby, Xenia Schafer, Colin Watson, Karin Schlichting, Christian Dahmann, and Stanislav Y Shvartsman. (2009) 2009. “Expression Patterns of Cadherin Genes in Drosophila Oogenesis.”. Gene Expr Patterns 9 (1): 31-6.