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Biological Evolution

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  • Botstein, David. (2011) 2011. “Genome-Sequencing Anniversary. Fruits of Genome Sequences for Biology.”. Science 331 (6020): 1025.
    Reference Link
  • Slotte, Tanja, Khaled M Hazzouri, David Stern, Peter Andolfatto, and Stephen I Wright. (2012) 2012. “Genetic Architecture and Adaptive Significance of the Selfing Syndrome in Capsella.”. Evolution 66 (5): 1360-74.
    Reference Link
  • Bachtrog, Doris, Kevin Thornton, Andrew Clark, and Peter Andolfatto. (2006) 2006. “Extensive Introgression of Mitochondrial DNA Relative to Nuclear Genes in the Drosophila Yakuba Species Group.”. Evolution 60 (2): 292-302.
    Reference Link
  • Davidson, Brad, and Michael Levine. (2003) 2003. “Evolutionary Origins of the Vertebrate Heart: Specification of the Cardiac Lineage in Ciona Intestinalis.”. Proc Natl Acad Sci U S A 100 (20): 11469-73.
    Reference Link
  • Jeong, Sangyun, Mark Rebeiz, Peter Andolfatto, Thomas Werner, John True, and Sean B Carroll. (2008) 2008. “The Evolution of Gene Regulation Underlies a Morphological Difference Between Two Drosophila Sister Species.”. Cell 132 (5): 783-93.
    Reference Link
  • Aardema, Matthew L, Ying Zhen, and Peter Andolfatto. (2012) 2012. “The Evolution of Cardenolide-Resistant Forms of Na⁺,K⁺ -ATPase in Danainae Butterflies.”. Mol Ecol 21 (2): 340-9.
    Reference Link
  • Haupaix, Nicolas, Philip Barron Abitua, Cathy Sirour, Hitoyoshi Yasuo, Michael Levine, and Clare Hudson. (2014) 2014. “Ephrin-Mediated Restriction of ERK1 2 Activity Delimits the Number of Pigment Cells in the Ciona CNS.”. Dev Biol 394 (1): 170-80.
    Reference Link
  • Stolfi, Alberto, Blair Gainous, John J Young, Alessandro Mori, Michael Levine, and Lionel Christiaen. (2010) 2010. “Early Chordate Origins of the Vertebrate Second Heart Field.”. Science 329 (5991): 565-8.
    Reference Link
  • Tilghman, S M. (1999) 1999. “The Sins of the Fathers and Mothers: Genomic Imprinting in Mammalian Development.”. Cell 96 (2): 185-93.
    Reference Link
  • Goltsev, Yury, Gustavo L Rezende, Karen Vranizan, Greg Lanzaro, Denise Valle, and Michael Levine. (2009) 2009. “Developmental and Evolutionary Basis for Drought Tolerance of the Anopheles Gambiae Embryo.”. Dev Biol 330 (2): 462-70.
    Reference Link
  • Peifer, M, and E Wieschaus. (1990) 1990. “The Segment Polarity Gene Armadillo Encodes a Functionally Modular Protein That Is the Drosophila Homolog of Human Plakoglobin.”. Cell 63 (6): 1167-76.
    Reference Link
  • Pfeifer, K, and S M Tilghman. (1994) 1994. “Allele-Specific Gene Expression in Mammals: The Curious Case of the Imprinted RNAs.”. Genes Dev 8 (16): 1867-74.
    Reference Link
  • Cui, Rongfeng, Molly Schumer, Karla Kruesi, Ronald Walter, Peter Andolfatto, and Gil G Rosenthal. (2013) 2013. “Phylogenomics Reveals Extensive Reticulate Evolution in Xiphophorus Fishes.”. Evolution 67 (8): 2166-79.
    Reference Link
  • Lakhina, Vanisha, and Coleen T Murphy. (2015) 2015. “Genome Sequencing Fishes Out Longevity Genes.”. Cell 163 (6): 1312-3. doi:10.1016/j.cell.2015.11.040.
    Reference Link
  • Dolinski, Kara, and David Botstein. 2007. “Orthology and Functional Conservation in Eukaryotes.”. Annu Rev Genet 41: 465-507.
    Reference Link
  • Engel, Philipp, Waldan K Kwong, Quinn McFrederick, Kirk E Anderson, Seth M Barribeau, James Angus Chandler, Scott Cornman, et al. (2016) 2016. “The Bee Microbiome: Impact on Bee Health and Model for Evolution and Ecology of Host-Microbe Interactions.”. MBio 7 (2). doi:10.1128/mBio.02164-15.
    Reference Link
  • Krotov, Dmitry, Julien Dubuis, Thomas Gregor, and William Bialek. (2014) 2014. “Morphogenesis at Criticality.”. Proc Natl Acad Sci U S A 111 (10): 3683-8.
    Reference Link
  • Cao, Chen, Laurence A Lemaire, Wei Wang, Peter H Yoon, Yoolim A Choi, Lance R Parsons, John C Matese, Wei Wang, Michael Levine, and Kai Chen. (2019) 2019. “Comprehensive Single-Cell Transcriptome Lineages of a Proto-Vertebrate.”. Nature 571 (7765): 349-54. doi:10.1038/s41586-019-1385-y.
    Reference Link
  • Shi, Cheng, and Coleen T Murphy. (2014) 2014. “Mating Induces Shrinking and Death in Caenorhabditis Mothers.”. Science 343 (6170): 536-40.
    Reference Link
  • Tucci, Serena, and Joshua Akey. (2019) 2019. “The Long Walk to African Genomics.”. Genome Biol 20 (1): 130. doi:10.1186/s13059-019-1740-1.
    Reference Link
  • Botstein, David. (2014) 2014. “Lasker∼Koshland to Genetics Pioneer.”. Cell 158 (6): 1230-2.
    Reference Link
  • Goyal, Sidhartha, and Ned S Wingreen. (2007) 2007. “Growth-Induced Instability in Metabolic Networks.”. Phys Rev Lett 98 (13): 138105.
    Reference Link

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