CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus. Author A Hark, C Schoenherr, D Katz, R Ingram, J Levorse, S Tilghman Publication Year 2000 Type Journal Article Abstract The Insulin-like growth factor 2 (Igf2) and H19 genes are imprinted, resulting in silencing of the maternal and paternal alleles, respectively. This event is dependent upon an imprinted-control region two kilobases upstream of H19 (refs 1, 2). On the paternal chromosome this element is methylated and required for the silencing of H19 (refs 2-4). On the maternal chromosome the region is unmethylated and required for silencing of the Igf2 gene 90 kilobases upstream. We have proposed that the unmethylated imprinted-control region acts as a chromatin boundary that blocks the interaction of Igf2 with enhancers that lie 3' of H19 (refs 5, 6). This enhancer-blocking activity would then be lost when the region was methylated, thereby allowing expression of Igf2 paternally. Here we show, using transgenic mice and tissue culture, that the unmethylated imprinted-control regions from mouse and human H19 exhibit enhancer-blocking activity. Furthermore, we show that CTCF, a zinc finger protein implicated in vertebrate boundary function, binds to several sites in the unmethylated imprinted-control region that are essential for enhancer blocking. Consistent with our model, CTCF binding is abolished by DNA methylation. This is the first example, to our knowledge, of a regulated chromatin boundary in vertebrates. Keywords Animals, Gene Expression Regulation, Mice, Mice, Transgenic, Humans, Enhancer Elements, Genetic, Transcription Factors, DNA, DNA-Binding Proteins, Protein Binding, Repressor Proteins, Cell Line, Regulatory Sequences, Nucleic Acid, Zinc Fingers, DNA Methylation, Genomic Imprinting, Muscle Proteins, RNA, Long Noncoding, RNA, Untranslated, Insulin-Like Growth Factor II Journal Nature Volume 405 Issue 6785 Pages 486-9 Date Published 05/2000 Alternate Journal Nature Google ScholarBibTeXEndNote X3 XML