Skinnider, Michael, Chris Dejong, Philip Rees, Chad Johnston, Haoxin Li, Andrew Webster, Morgan Wyatt, and Nathan Magarvey. (2015) 2015. “Genomes to Natural Products PRediction Informatics for Secondary Metabolomes (PRISM).”. Nucleic Acids Research 43 (20): 9645-62. doi:10.1093/nar/gkv1012.

Skinnider, Michael, Chris Dejong, Brian Franczak, Paul McNicholas, and Nathan Magarvey. (2017) 2017. “Comparative Analysis of Chemical Similarity Methods for Modular Natural Products With a Hypothetical Structure Enumeration Algorithm.”. Journal of Cheminformatics 9 (1): 46. doi:10.1186/s13321-017-0234-y.

Skinnider, Michael, Chad Johnston, Mathusan Gunabalasingam, Nishanth Merwin, Agata Kieliszek, Robyn MacLellan, Haoxin Li, et al. (2020) 2020. “Comprehensive Prediction of Secondary Metabolite Structure and Biological Activity from Microbial Genome Sequences.”. Nature Communications 11 (1): 6058. doi:10.1038/s41467-020-19986-1.

Skinnider, Michael, Jordan Squair, Claudia Kathe, Mark Anderson, Matthieu Gautier, Kaya Matson, Marco Milano, et al. (2021) 2021. “Cell Type Prioritization in Single-Cell Data.”. Nature Biotechnology 39 (1): 30-34. doi:10.1038/s41587-020-0605-1.

Skinnider, Michael, and Leonard Foster. (2021) 2021. “Meta-Analysis Defines Principles for the Design and Analysis of Co-Fractionation Mass Spectrometry Experiments.”. Nature Methods 18 (7): 806-15. doi:10.1038/s41592-021-01194-4.

Squair, Jordan, Matthieu Gautier, Claudia Kathe, Mark Anderson, Nicholas James, Thomas Hutson, Rémi Hudelle, et al. (2021) 2021. “Confronting False Discoveries in Single-Cell Differential Expression.”. Nature Communications 12 (1): 5692. doi:10.1038/s41467-021-25960-2.

Skinnider, Michael, Nichollas Scott, Anna Prudova, Craig Kerr, Nikolay Stoynov, Greg Stacey, Queenie Chan, David Rattray, Jörg Gsponer, and Leonard Foster. (2021) 2021. “An Atlas of Protein-Protein Interactions across Mouse Tissues.”. Cell 184 (15): 4073-4089.e17. doi:10.1016/j.cell.2021.06.003.

Kathe, Claudia, Michael Skinnider, Thomas Hutson, Nicola Regazzi, Matthieu Gautier, Robin Demesmaeker, Salif Komi, et al. (2022) 2022. “The Neurons That Restore Walking After Paralysis.”. Nature 611 (7936): 540-47. doi:10.1038/s41586-022-05385-7.