Pilizota, Teuta, and Joshua W Shaevitz. (2014) 2014. “Origins of Escherichia Coli Growth Rate and Cell Shape Changes at High External Osmolality.”. Biophys J 107 (8): 1962-9.

Abbondanzieri, Elio A, William J Greenleaf, Joshua W Shaevitz, Robert Landick, and Steven M Block. (2005) 2005. “Direct Observation of Base-Pair Stepping by RNA Polymerase.”. Nature 438 (7067): 460-5.

Berman, Gordon J, William Bialek, and Joshua W Shaevitz. (2016) 2016. “Predictability and Hierarchy in Drosophila Behavior.”. Proc Natl Acad Sci U S A 113 (42): 11943-48. doi:10.1073/pnas.1607601113.

Borenstein, David Bruce, Yigal Meir, Joshua W Shaevitz, and Ned S Wingreen. 2013. “Non-Local Interaction via Diffusible Resource Prevents Coexistence of Cooperators and Cheaters in a Lattice Model.”. PLoS One 8 (5): e63304.

Deng, Yi, Mingzhai Sun, and Joshua W Shaevitz. (2011) 2011. “Direct Measurement of Cell Wall Stress Stiffening and Turgor Pressure in Live Bacterial Cells.”. Phys Rev Lett 107 (15): 158101.

Koch, Matthias D, and Joshua W Shaevitz. 2017. “Introduction to Optical Tweezers.”. Methods Mol Biol 1486: 3-24. doi:10.1007/978-1-4939-6421-5_1.

Balagam, Rajesh, Douglas B Litwin, Fabian Czerwinski, Mingzhai Sun, Heidi B Kaplan, Joshua W Shaevitz, and Oleg A Igoshin. (2014) 2014. “Myxococcus Xanthus Gliding Motors Are Elastically Coupled to the Substrate As Predicted by the Focal Adhesion Model of Gliding Motility.”. PLoS Comput Biol 10 (5): e1003619.

Shaevitz, Joshua W, and Daniel A Fletcher. 2008. “Curvature and Torsion in Growing Actin Networks.”. Phys Biol 5 (2): 026006.

Bartlett, Thomas M, Benjamin P Bratton, Amit Duvshani, Amanda Miguel, Ying Sheng, Nicholas R Martin, Jeffrey P Nguyen, et al. (2017) 2017. “A Periplasmic Polymer Curves Vibrio Cholerae and Promotes Pathogenesis.”. Cell 168 (1-2): 172-185.e15. doi:10.1016/j.cell.2016.12.019.

Sun, Mingzhai, Morgane Wartel, Eric Cascales, Joshua W Shaevitz, and Tâm Mignot. (2011) 2011. “Motor-Driven Intracellular Transport Powers Bacterial Gliding Motility.”. Proc Natl Acad Sci U S A 108 (18): 7559-64.

Shaevitz, Joshua W. (2013) 2013. “Combining Modeling and Experiment to Understand Bacterial Growth.”. Biophys J 104 (12): 2573.

Klibaite, Ugne, Gordon J Berman, Jessica Doran Cande, David L Stern, and Joshua W Shaevitz. (2017) 2017. “An Unsupervised Method for Quantifying the Behavior of Paired Animals.”. Phys Biol 14 (1): 015006. doi:10.1088/1478-3975/aa5c50.

Huang, Kerwyn Casey, David W Ehrhardt, and Joshua W Shaevitz. (2012) 2012. “The Molecular Origins of Chiral Growth in Walled Cells.”. Curr Opin Microbiol 15 (6): 707-14.

van Teeffelen, Sven, Siyuan Wang, Leon Furchtgott, Kerwyn Casey Huang, Ned S Wingreen, Joshua W Shaevitz, and Zemer Gitai. (2011) 2011. “The Bacterial Actin MreB Rotates, and Rotation Depends on Cell-Wall Assembly.”. Proc Natl Acad Sci U S A 108 (38): 15822-7.

Nguyen, Jeffrey P, Ashley N Linder, George S Plummer, Joshua W Shaevitz, and Andrew M Leifer. (2017) 2017. “Automatically Tracking Neurons in a Moving and Deforming Brain.”. PLoS Comput Biol 13 (5): e1005517. doi:10.1371/journal.pcbi.1005517.

Shaevitz, Joshua W. (2008) 2008. “Super-Resolution for a 3D World.”. Nat Methods 5 (6): 471-2.

Wang, Siyuan, and Joshua W Shaevitz. 2013. “The Mechanics of Shape in Prokaryotes.”. Front Biosci (Schol Ed) 5: 564-74.

Shaevitz, Joshua W, Elio A Abbondanzieri, Robert Landick, and Steven M Block. (2003) 2003. “Backtracking by Single RNA Polymerase Molecules Observed at Near-Base-Pair Resolution.”. Nature 426 (6967): 684-7.

Sabass, Benedikt, Matthias D Koch, Guannan Liu, Howard A Stone, and Joshua W Shaevitz. (2017) 2017. “Force Generation by Groups of Migrating Bacteria.”. Proc Natl Acad Sci U S A 114 (28): 7266-71. doi:10.1073/pnas.1621469114.

Shaevitz, Joshua W, and Zemer Gitai. (2010) 2010. “The Structure and Function of Bacterial Actin Homologs.”. Cold Spring Harb Perspect Biol 2 (9): a000364.

Wang, Siyuan, Hugo Arellano-Santoyo, Peter A Combs, and Joshua W Shaevitz. 2010. “Measuring the Bending Stiffness of Bacterial Cells Using an Optical Trap.”. J Vis Exp, no. 38.

Lang, Matthew J, Charles L Asbury, Joshua W Shaevitz, and Steven M Block. (2002) 2002. “An Automated Two-Dimensional Optical Force Clamp for Single Molecule Studies.”. Biophys J 83 (1): 491-501.

Liu, George S, Benjamin P Bratton, Zemer Gitai, and Joshua W Shaevitz. 2017. “The Effect of Antibiotics on Protein Diffusion in the Escherichia Coli Cytoplasmic Membrane.”. PLoS One 12 (10): e0185810. doi:10.1371/journal.pone.0185810.

Shaevitz, Joshua W, Steven M Block, and Mark J Schnitzer. (2005) 2005. “Statistical Kinetics of Macromolecular Dynamics.”. Biophys J 89 (4): 2277-85.

Berman, Gordon J, Daniel M Choi, William Bialek, and Joshua W Shaevitz. (2014) 2014. “Mapping the Stereotyped Behaviour of Freely Moving Fruit Flies.”. J R Soc Interface 11 (99).

Mignot, Tâm, and Joshua W Shaevitz. (2008) 2008. “Active and Passive Mechanisms of Intracellular Transport and Localization in Bacteria.”. Curr Opin Microbiol 11 (6): 580-5.

Shaevitz, Joshua W, Joanna Y Lee, and Daniel A Fletcher. (2005) 2005. “Spiroplasma Swim by a Processive Change in Body Helicity.”. Cell 122 (6): 941-5.

Shaevitz, Joshua W, and Daniel A Fletcher. (2007) 2007. “Load Fluctuations Drive Actin Network Growth.”. Proc Natl Acad Sci U S A 104 (40): 15688-92.

Wang, Siyuan, Hugo Arellano-Santoyo, Peter A Combs, and Joshua W Shaevitz. (2010) 2010. “Actin-Like Cytoskeleton Filaments Contribute to Cell Mechanics in Bacteria.”. Proc Natl Acad Sci U S A 107 (20): 9182-5.

Deng, Yi, Mingzhai Sun, Pei-Hui Lin, Jianjie Ma, and Joshua W Shaevitz. 2014. “Spatial Covariance Reconstructive (SCORE) Super-Resolution Fluorescence Microscopy.”. PLoS One 9 (4): e94807.

van Teeffelen, Sven, Joshua W Shaevitz, and Zemer Gitai. (2012) 2012. “Image Analysis in Fluorescence Microscopy: Bacterial Dynamics As a Case Study.”. Bioessays 34 (5): 427-36.

Thutupalli, Shashi, Mingzhai Sun, Filiz Bunyak, Kannappan Palaniappan, and Joshua W Shaevitz. (2015) 2015. “Directional Reversals Enable Myxococcus Xanthus Cells to Produce Collective One-Dimensional Streams During Fruiting-Body Formation.”. J R Soc Interface 12 (109): 20150049. doi:10.1098/rsif.2015.0049.

Rosenbluth, Michael J, Ailey Crow, Joshua W Shaevitz, and Daniel A Fletcher. (2008) 2008. “Slow Stress Propagation in Adherent Cells.”. Biophys J 95 (12): 6052-9.

Wang, Siyuan, Leon Furchtgott, Kerwyn Casey Huang, and Joshua W Shaevitz. (2012) 2012. “Helical Insertion of Peptidoglycan Produces Chiral Ordering of the Bacterial Cell Wall.”. Proc Natl Acad Sci U S A 109 (10).

Bratton, Benjamin P, and Joshua W Shaevitz. 2015. “Simple Experimental Methods for Determining the Apparent Focal Shift in a Microscope System.”. PLoS One 10 (8): e0134616. doi:10.1371/journal.pone.0134616.

Ursell, Tristan S, Jeffrey Nguyen, Russell D Monds, Alexandre Colavin, Gabriel Billings, Nikolay Ouzounov, Zemer Gitai, Joshua W Shaevitz, and Kerwyn Casey Huang. (2014) 2014. “Rod-Like Bacterial Shape Is Maintained by Feedback Between Cell Curvature and Cytoskeletal Localization.”. Proc Natl Acad Sci U S A 111 (11).

Pilizota, Teuta, and Joshua W Shaevitz. 2012. “Fast, Multiphase Volume Adaptation to Hyperosmotic Shock by Escherichia Coli.”. PLoS One 7 (4): e35205.

Morgenstein, Randy M, Benjamin P Bratton, Jeffrey P Nguyen, Nikolay Ouzounov, Joshua W Shaevitz, and Zemer Gitai. (2015) 2015. “RodZ Links MreB to Cell Wall Synthesis to Mediate MreB Rotation and Robust Morphogenesis.”. Proc Natl Acad Sci U S A 112 (40): 12510-5. doi:10.1073/pnas.1509610112.

Block, Steven M, Charles L Asbury, Joshua W Shaevitz, and Matthew J Lang. (2003) 2003. “Probing the Kinesin Reaction Cycle With a 2D Optical Force Clamp.”. Proc Natl Acad Sci U S A 100 (5): 2351-6.

Mignot, Tâm, Joshua W Shaevitz, Patricia L Hartzell, and David R Zusman. (2007) 2007. “Evidence That Focal Adhesion Complexes Power Bacterial Gliding Motility.”. Science 315 (5813): 853-6.

Nguyen, Jeffrey P, Frederick B Shipley, Ashley N Linder, George S Plummer, Mochi Liu, Sagar U Setru, Joshua W Shaevitz, and Andrew M Leifer. (2016) 2016. “Whole-Brain Calcium Imaging With Cellular Resolution in Freely Behaving Caenorhabditis Elegans.”. Proc Natl Acad Sci U S A 113 (8). doi:10.1073/pnas.1507110112.

Pilizota, Teuta, and Joshua W Shaevitz. (2013) 2013. “Plasmolysis and Cell Shape Depend on Solute Outer-Membrane Permeability During Hyperosmotic Shock in E. Coli.”. Biophys J 104 (12): 2733-42.

Shaevitz, Joshua W, and Daniel A Fletcher. (2007) 2007. “Enhanced Three-Dimensional Deconvolution Microscopy Using a Measured Depth-Varying Point-Spread Function.”. J Opt Soc Am A Opt Image Sci Vis 24 (9): 2622-7.

Wang, Qingqing, Matthew Taliaferro, Ugne Klibaite, Valérie Hilgers, Joshua W Shaevitz, and Donald C Rio. (2016) 2016. “The PSI-U1 SnRNP Interaction Regulates Male Mating Behavior in Drosophila.”. Proc Natl Acad Sci U S A 113 (19): 5269-74. doi:10.1073/pnas.1600936113.

Abbondanzieri, Elio A, Joshua W Shaevitz, and Steven M Block. (2005) 2005. “Picocalorimetry of Transcription by RNA Polymerase.”. Biophys J 89 (6).

Deng, Yi, Philip Coen, Mingzhai Sun, and Joshua W Shaevitz. 2013. “Efficient Multiple Object Tracking Using Mutually Repulsive Active Membranes.”. PLoS One 8 (6): e65769.

Nguyen, Jeffrey P, Benjamin P Bratton, and Joshua W Shaevitz. 2016. “Biophysical Measurements of Bacterial Cell Shape.”. Methods Mol Biol 1440: 227-45. doi:10.1007/978-1-4939-3676-2_17.

Polyakov, Oleg, Bing He, Michael Swan, Joshua W Shaevitz, Matthias Kaschube, and Eric Wieschaus. (2014) 2014. “Passive Mechanical Forces Control Cell-Shape Change During Drosophila Ventral Furrow Formation.”. Biophys J 107 (4): 998-1010.

Deng, Yi, and Joshua W Shaevitz. (2009) 2009. “Effect of Aberration on Height Calibration in Three-Dimensional Localization-Based Microscopy and Particle Tracking.”. Appl Opt 48 (10): 1886-90.

Ouzounov, Nikolay, Jeffrey P Nguyen, Benjamin P Bratton, David Jacobowitz, Zemer Gitai, and Joshua W Shaevitz. (2016) 2016. “MreB Orientation Correlates With Cell Diameter in Escherichia Coli.”. Biophys J 111 (5): 1035-43. doi:10.1016/j.bpj.2016.07.017.