Ochoa, Alejandro, Manuel Llinás, and Mona Singh. 2011. “Using Context to Improve Protein Domain Identification.”. BMC Bioinformatics 12: 90. Reference Link
Caudy, Amy A, Yuanfang Guan, Yue Jia, Christina Hansen, Chris DeSevo, Alicia P Hayes, Joy Agee, et al. (2013) 2013. “A New System for Comparative Functional Genomics of Saccharomyces Yeasts.”. Genetics 195 (1): 275-87. Reference Link
Olszewski, Kellen L, Joanne M Morrisey, Daniel Wilinski, James M Burns, Akhil B Vaidya, Joshua D Rabinowitz, and Manuel Llinás. (2009) 2009. “Host-Parasite Interactions Revealed by Plasmodium Falciparum Metabolomics.”. Cell Host Microbe 5 (2): 191-9. Reference Link
Olszewski, Kellen L, Michael W Mather, Joanne M Morrisey, Benjamin A Garcia, Akhil B Vaidya, Joshua D Rabinowitz, and Manuel Llinás. (2010) 2010. “Branched Tricarboxylic Acid Metabolism in Plasmodium Falciparum.”. Nature 466 (7307): 774-8. Reference Link
Ochoa, Alejandro, John D Storey, Manuel Llinás, and Mona Singh. (2015) 2015. “Beyond the E-Value: Stratified Statistics for Protein Domain Prediction.”. PLoS Comput Biol 11 (11): e1004509. Reference Link