Ju, Wenjun, Casey S Greene, Felix Eichinger, Viji Nair, Jeffrey B Hodgin, Markus Bitzer, Young-suk Lee, et al. (2013) 2013. “Defining Cell-Type Specificity at the Transcriptional Level in Human Disease.”. Genome Res 23 (11): 1862-73. Reference Link
Nirschl, Christopher J, Mayte Suárez-Fariñas, Benjamin Izar, Sanjay Prakadan, Ruth Dannenfelser, Itay Tirosh, Yong Liu, et al. (2017) 2017. “IFNγ-Dependent Tissue-Immune Homeostasis Is Co-Opted in the Tumor Microenvironment.”. Cell 170 (1): 127-141.e15. doi:10.1016/j.cell.2017.06.016. Reference Link
Lee, Young-suk, Aaron K Wong, Alicja Tadych, Boris M Hartmann, Christopher Y Park, Veronica A DeJesus, Irene Ramos, Elena Zaslavsky, Stuart C Sealfon, and Olga G Troyanskaya. (2018) 2018. “Interpretation of an Individual Functional Genomics Experiment Guided by Massive Public Data.”. Nat Methods 15 (12): 1049-52. doi:10.1038/s41592-018-0218-5. Reference Link
Lee, Young-suk, Arjun Krishnan, Rose Oughtred, Jennifer Rust, Christie S Chang, Joseph Ryu, Vessela N Kristensen, Kara Dolinski, Chandra L Theesfeld, and Olga G Troyanskaya. (2019) 2019. “A Computational Framework for Genome-Wide Characterization of the Human Disease Landscape.”. Cell Syst 8 (2): 152-162.e6. doi:10.1016/j.cels.2018.12.010. Reference Link
Park, Christopher Y, Arjun Krishnan, Qian Zhu, Aaron K Wong, Young-suk Lee, and Olga G Troyanskaya. (2014) 2014. “Tissue-Aware Data Integration Approach for the Inference of Pathway Interactions in Metazoan Organisms.”. Bioinformatics. Reference Link
Lee, Young-suk, Arjun Krishnan, Qian Zhu, and Olga G Troyanskaya. (2013) 2013. “Ontology-Aware Classification of Tissue and Cell-Type Signals in Gene Expression Profiles across Platforms and Technologies.”. Bioinformatics 29 (23): 3036-44. Reference Link