Greene, Casey S, Arjun Krishnan, Aaron K Wong, Emanuela Ricciotti, Rene A Zelaya, Daniel S Himmelstein, Ran Zhang, et al. (2015) 2015. “Understanding Multicellular Function and Disease With Human Tissue-Specific Networks.”. Nat Genet 47 (6): 569-76.

Zhu, Qian, Aaron K Wong, Arjun Krishnan, Miriam R Aure, Alicja Tadych, Ran Zhang, David C Corney, et al. (2015) 2015. “Targeted Exploration and Analysis of Large Cross-Platform Human Transcriptomic Compendia.”. Nat Methods 12 (3): 211-4, 3 p following 214.

Greene, Casey S, and Olga G Troyanskaya. (2011) 2011. “PILGRM: An Interactive Data-Driven Discovery Platform for Expert Biologists.”. Nucleic Acids Res 39 (Web Server issue).

Greene, Casey S, and Olga G Troyanskaya. (2010) 2010. “Integrative Systems Biology for Data-Driven Knowledge Discovery.”. Semin Nephrol 30 (5): 443-54.

Wong, Aaron K, Christopher Y Park, Casey S Greene, Lars A Bongo, Yuanfang Guan, and Olga G Troyanskaya. (2012) 2012. “IMP: A Multi-Species Functional Genomics Portal for Integration, Visualization and Prediction of Protein Functions and Networks.”. Nucleic Acids Res 40 (Web Server issue).

Park, Christopher Y, Aaron K Wong, Casey S Greene, Jessica Rowland, Yuanfang Guan, Lars A Bongo, Rebecca Burdine, and Olga G Troyanskaya. 2013. “Functional Knowledge Transfer for High-Accuracy Prediction of under-Studied Biological Processes.”. PLoS Comput Biol 9 (3): e1002957.

Ju, Wenjun, Casey S Greene, Felix Eichinger, Viji Nair, Jeffrey B Hodgin, Markus Bitzer, Young-suk Lee, et al. (2013) 2013. “Defining Cell-Type Specificity at the Transcriptional Level in Human Disease.”. Genome Res 23 (11): 1862-73.

Greene, Casey S, and Olga G Troyanskaya. 2012. “Chapter 2: Data-Driven View of Disease Biology.”. PLoS Comput Biol 8 (12): e1002816.

Greene, Casey S, and Olga G Troyanskaya. (2012) 2012. “Accurate Evaluation and Analysis of Functional Genomics Data and Methods.”. Ann N Y Acad Sci 1260: 95-100.