William Bialek Position John Archibald Wheeler/Battelle Professor in Physics and the Lewis-Sigler Institute for Integrative Genomics Role Director, Program in Biophysics Title Physics and the Lewis-Sigler Institute for Integrative Genomics CV William Bialek CV Office Phone 609-258-5929 Email [email protected] Office 237 Carl Icahn Laboratory Bio/Description Research FocusInterested in the interface between physics and biology, broadly interpreted. A central theme in my research is an appreciation for how well things "work" in biological systems. It is, after all, some notion of functional behavior that distinguishes life from inanimate matter, and it is a challenge to quantify this functionality in a language that parallels our characterization of other physical systems. Strikingly, when we do this (and there are not so many cases where it has been done!), the performance of biological systems often approaches some limits set by basic physicalprinciples. While it is popular to view biological mechanisms as an historical record of evolutionary and developmental compromises, these observations on functional performance point toward a very different view of life as having selected a set of near optimal mechanisms for its most crucial tasks. Even if this view is wrong, it suggests a theoretical physicist's idealization; the construction of this idealization and the attempt to calibrate the performance of real biological systems against this ideal provides a productive route for the interaction of theory and experiment, and in several cases this effort has led to the discovery of new phenomena. The idea of performance near the physical limits crosses many levels of biological organization, from single molecules to cells to perception and learning in the brain, and I have tried to contribute to this whole range of problems.PublicationsLinks to pdf versions of the papers, as available. Users are responsible for compliance with copyright restrictions.References to the physics e-print archive http://arxiv.org are given where available. For preprints this is a primary reference; for other work there may be slight differences between the e-print and conventional print versions of the paper. Since almost all of my papers are now deposited on the archive before journal publication, more recent papers are ordered by the date of the archive submission.Complete list of PublicationsGoogle Scholar Selected Publications Rajan, Kanaka, and William Bialek. 2013. “Maximally Informative ‘stimulus Energies’ in the Analysis of Neural Responses to Natural Signals.”. PLoS One 8 (11): e71959. Dubuis, Julien, Gašper Tkačik, Eric F Wieschaus, Thomas Gregor, and William Bialek. (2013) 2013. “Positional Information, in Bits.”. Proc Natl Acad Sci U S A 110 (41): 16301-8. Tkačik, Gašper, Aleksandra M Walczak, and William Bialek. (2012) 2012. “Optimizing Information Flow in Small Genetic Networks. III. A Self-Interacting Gene.”. Phys Rev E Stat Nonlin Soft Matter Phys 85 (4 Pt 1): 041903. Bialek, William, Andrea Cavagna, Irene Giardina, Thierry Mora, Edmondo Silvestri, Massimiliano Viale, and Aleksandra M Walczak. (2012) 2012. “Statistical Mechanics for Natural Flocks of Birds.”. Proc Natl Acad Sci U S A 109 (13): 4786-91. Stephens, Greg J, Leslie C Osborne, and William Bialek. (2011) 2011. “Searching for Simplicity in the Analysis of Neurons and Behavior.”. Proc Natl Acad Sci U S A 108 Suppl 3: 15565-71. Walczak, Aleksandra M, Gašper Tkačik, and William Bialek. (2010) 2010. “Optimizing Information Flow in Small Genetic Networks. II. Feed-Forward Interactions.”. Phys Rev E Stat Nonlin Soft Matter Phys 81 (4 Pt 1): 041905. Castellana, Michele, and William Bialek. (2014) 2014. “Inverse Spin Glass and Related Maximum Entropy Problems.”. Phys Rev Lett 113 (11): 117204. Stephens, Greg J, Matthew Bueno de Mesquita, William S Ryu, and William Bialek. (2011) 2011. “Emergence of Long Timescales and Stereotyped Behaviors in Caenorhabditis Elegans.”. Proc Natl Acad Sci U S A 108 (18): 7286-9. Mora, Thierry, Aleksandra M Walczak, William Bialek, and Curtis G Callan. (2010) 2010. “Maximum Entropy Models for Antibody Diversity.”. Proc Natl Acad Sci U S A 107 (12): 5405-10. Stephens, Greg J, Bethany Johnson-Kerner, William Bialek, and William S Ryu. 2010. “From Modes to Movement in the Behavior of Caenorhabditis Elegans.”. PLoS One 5 (11): e13914. View all publications Tkačik, Gašper, Aleksandra M Walczak, and William Bialek. (2009) 2009. “Optimizing Information Flow in Small Genetic Networks.”. Phys Rev E Stat Nonlin Soft Matter Phys 80 (3 Pt 1): 031920. Related News Princeton faculty Bialek, Dennehy, Mian, Perry, Ralph and Taylor and three graduate alumni win 2021 Guggenheim FellowshipsHow the fruit fly got its stripes: Researchers explore the precision of embryonic development Program(s) Biophysics Graduate Program NIH NHGRI Training Program QCB Graduate Program Research Area Biophysics: Theory and Experiment Systems Biology: Development/Aging LSI Research Lab Bialek Research Lab