Julien F. Ayroles Position Assistant Professor, Ecology and Evolutionary Biology and the Lewis-Sigler Institute for Integrative Genomics Title Ecology and Evolutionary Biology and the Lewis-Sigler Institute for Integrative Genomics Office Phone 609-258-8422 Email [email protected] Office 150 Carl Icahn Laboratory Bio/Description Research Focus Enabled by powerful genomic technologies, quantitative genetics has focused on identifying functional variants in order to build the genotype-phenotype map. The goal is to formulate models, that describe the population genetic dynamics of these variants, and to connect their evolutionary trajectory to proximal molecular mechanisms and ultimately ecological factors. This is clearly a tall order, but the field is making great progress in this direction. I am interested in understanding the emergence of variation in co-regulated gene networks and how such variation gives rise to phenotypic variation. Allelic effects are clearly context dependent, influenced both by genetic background and by the environment. This realization has far reaching implications ranging from our understanding of response to selection to our understanding of the genetic basis of human disease and the ability to predict phenotype from genotype. The challenge now is to embrace this complexity and develop an experimental and analytical framework that will inform how the genotype-phenotype map influences and is influenced by evolution. Ultimately, I want to understand how natural selection shapes genetic variation and reshapes genomic architecture to produce adaptive phenotypes. Google Scholar Selected Publications Ayroles, Julien, Sean M Buchanan, Chelsea O’Leary, Kyobi Skutt-Kakaria, Jennifer K Grenier, Andrew Clark, Daniel L Hartl, and Benjamin L de Bivort. (2015) 2015. “Behavioral Idiosyncrasy Reveals Genetic Control of Phenotypic Variability.”. Proc Natl Acad Sci U S A 112 (21): 6706-11. Corbett-Detig, Russell B, Jun Zhou, Andrew Clark, Daniel L Hartl, and Julien Ayroles. (2013) 2013. “Genetic Incompatibilities Are Widespread Within Species.”. Nature 504 (7478): 135-7. Huang, Wen, Stephen Richards, Mary Anna Carbone, Dianhui Zhu, Robert Anholt, Julien Ayroles, Laura Duncan, et al. (2012) 2012. “Epistasis Dominates the Genetic Architecture of Drosophila Quantitative Traits.”. Proc Natl Acad Sci U S A 109 (39): 15553-9. Massouras, Andreas, Sebastian M Waszak, Monica Albarca-Aguilera, Korneel Hens, Wiebke Holcombe, Julien Ayroles, Emmanouil T Dermitzakis, et al. 2012. “Genomic Variation and Its Impact on Gene Expression in Drosophila Melanogaster.”. PLoS Genet 8 (11): e1003055. Mackay, Trudy F C, Stephen Richards, Eric A Stone, Antonio Barbadilla, Julien Ayroles, Dianhui Zhu, Sònia Casillas, et al. (2012) 2012. “The Drosophila Melanogaster Genetic Reference Panel.”. Nature 482 (7384): 173-8. Ober, Ulrike, Julien Ayroles, Eric A Stone, Stephen Richards, Dianhui Zhu, Richard A Gibbs, Christian Stricker, et al. 2012. “Using Whole-Genome Sequence Data to Predict Quantitative Trait Phenotypes in Drosophila Melanogaster.”. PLoS Genet 8 (5): e1002685. Rowe, Kevin C, Sonal Singhal, Matthew D Macmanes, Julien Ayroles, Toni Lyn Morelli, Emily M Rubidge, Ke Bi, and Craig C Moritz. (2011) 2011. “Museum Genomics: Low-Cost and High-Accuracy Genetic Data from Historical Specimens.”. Mol Ecol Resour 11 (6): 1082-92. Jumbo-Lucioni, Patricia, Julien Ayroles, Michelle Chambers, Katherine W Jordan, Jeff Leips, Trudy Fc Mackay, and Maria De Luca. 2010. “Systems Genetics Analysis of Body Weight and Energy Metabolism Traits in Drosophila Melanogaster.”. BMC Genomics 11: 297. Edwards, Alexis C, Julien Ayroles, Eric A Stone, Mary Anna Carbone, Richard F Lyman, and Trudy F C Mackay. 2009. “A Transcriptional Network Associated With Natural Variation in Drosophila Aggressive Behavior.”. Genome Biol 10 (7): R76. Mackay, Trudy F C, Eric A Stone, and Julien Ayroles. (2009) 2009. “The Genetics of Quantitative Traits: Challenges and Prospects.”. Nat Rev Genet 10 (8): 565-77. View all publications Morozova, Tatiana, V, Julien Ayroles, Katherine W Jordan, Laura Duncan, Mary Anna Carbone, Richard F Lyman, Eric A Stone, et al. (2009) 2009. “Alcohol Sensitivity in Drosophila: Translational Potential of Systems Genetics.”. Genetics 183 (2): 733-45, 1SI. Harbison, Susan T, Mary Anna Carbone, Julien Ayroles, Eric A Stone, Richard F Lyman, and Trudy F C Mackay. (2009) 2009. “Co-Regulated Transcriptional Networks Contribute to Natural Genetic Variation in Drosophila Sleep.”. Nat Genet 41 (3): 371-5. Ayroles, Julien, Mary Anna Carbone, Eric A Stone, Katherine W Jordan, Richard F Lyman, Michael M Magwire, Stephanie M Rollmann, et al. (2009) 2009. “Systems Genetics of Complex Traits in Drosophila Melanogaster.”. Nat Genet 41 (3): 299-307. Program(s) NIH NHGRI Training Program QCB Graduate Program Research Area Evolutionary and Population Genomics Experimental Genomics LSI Research Lab Ayroles Research Lab