Discovery of biological networks from diverse functional genomic data.

Title	Discovery of biological networks from diverse functional genomic data.
Publication Type	Journal Article
Year of Publication	2005
Authors	Myers, CL, Robson, D, Wible, A, Hibbs, MA, Chiriac, C, Theesfeld, CL, Dolinski, K, Troyanskaya, OG
Journal	Genome Biol
Volume	6
Issue	13
Pagination	R114
Date Published	2005
Keywords	Bayes Theorem, Cell Cycle Proteins, Computational Biology, Computer Graphics, Genomics, HSP90 Heat-Shock Proteins, Molecular Chaperones, Protein Interaction Mapping, Reproducibility of Results, Saccharomyces cerevisiae, Saccharomyces cerevisiae Proteins
Abstract	We have developed a general probabilistic system for query-based discovery of pathway-specific networks through integration of diverse genome-wide data. This framework was validated by accurately recovering known networks for 31 biological processes in Saccharomyces cerevisiae and experimentally verifying predictions for the process of chromosomal segregation. Our system, bioPIXIE, a public, comprehensive system for integration, analysis, and visualization of biological network predictions for S. cerevisiae, is freely accessible over the worldwide web.
Alternate Journal	Genome Biol.